Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1366 |
Symbol | |
ID | 3906568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1641531 |
End bp | 1642463 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637878703 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_480472 |
Protein GI | 86740072 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.4191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGG GCCAGACTGC CCCCGCCGCC GGCCCGGCGA CCGACTCCGC CCGGCATGCC GGTACCGCCC GCGTCAAGCG CGGCATGGCG GAGATGCTCA AGGGCGGTGT GATCATGGAT GTGGTCACCG CCGAGCAGGC CCGCATCGCC GAGGACGCCG GCGCCGTCGC GGTGATGGCG CTGGAGCGGG TTCCCGCCGA CATCCGGGCG CAGGGTGGGG TGGCGCGGAT GAGTGATCCC GACATGATCT CGGAGATCAT CGAGGCGGTC TCCATCCCGG TCATGGCCAA GGCCCGGATC GGGCATTTCG TCGAGGCACA GGTGCTGCAG GCGCTCGGGG TGGACTACGT CGACGAGTCC GAGGTTCTCA CGCCTGCCGA CCCGCACCAC CACATCGACA AGTGGCGCTT CACGGTGCCG TTCGTCTGCG GAGCCACCAA CCTGGGGGAG GCGCTGCGCC GGATCGCCGA GGGCGCGGCG ATGATCCGTT CCAAGGGTGA GGCGGGCACC GGCGAGGTGT CCAACGCCGT GGTGCACATG CGTACCATCC GGGCGGAGAT CGCCCGGCTG TCGGGGCTGC CCGCCGAGGA GCTCTACGCG GCGGCCAAGG AGCTGCGCGC CCCGGTCGAG CTGGTCGCCG AGGTGGCCCG GCTCGGTCGG CTGCCCGTCG TGCTGTTCAC CGCCGGCGGT ATCGCCACCC CGGCGGACGC GGCGCTGATG ATGCAGCTCG GCGCGGACGG GGTGTTCGTC GGGTCCGGGA TCTTCAAGTC CGGGGACCCG GCGCGCCGCG CTCGGGCCAT CGTCGAGGCG ACCACCATGT TCAAGGACCC CGACGTTCTG GTGAAGGTCT CCCGGGGCCT TGGCGAGGCG ATGGTAGGCA TCAACGTCAC CGAGCTTCCC CCGGAAGCCC GCTACGCCGA CCGCGGCTGG TGA
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Protein sequence | MSEGQTAPAA GPATDSARHA GTARVKRGMA EMLKGGVIMD VVTAEQARIA EDAGAVAVMA LERVPADIRA QGGVARMSDP DMISEIIEAV SIPVMAKARI GHFVEAQVLQ ALGVDYVDES EVLTPADPHH HIDKWRFTVP FVCGATNLGE ALRRIAEGAA MIRSKGEAGT GEVSNAVVHM RTIRAEIARL SGLPAEELYA AAKELRAPVE LVAEVARLGR LPVVLFTAGG IATPADAALM MQLGADGVFV GSGIFKSGDP ARRARAIVEA TTMFKDPDVL VKVSRGLGEA MVGINVTELP PEARYADRGW
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