Gene Francci3_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1364 
Symbol 
ID3906566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1639606 
End bp1640772 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content73% 
IMG OID637878701 
Productphosphatidylinositol alpha-mannosyltransferase 
Protein accessionYP_480470 
Protein GI86740070 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.413913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATCG GTCTGGCCTG CCCCTATGCC TGGGACGTAC CGGGCGGGGT CCAGGCGCAC 
GTGCGTGACC TCGCCGAGAC CCTGATCGCC GCCGGTCACG AGGTGTCCGT CATCACCCCG
GTGGACGACG AACGGACCCT GCCGCCCTAC GCGGTGGACG CGGGTCGGGC GTTACCGCTG
CCCTACAACG GCTCCGTCGC CCGGCTCCTG ATGGGCCCGG TCTCGGCCGC CCGGGTCCGC
CGTTGGCTGC GTGAGCACGA CTTCGATGTC CTGCACGCCC ACGAACCGAC CGCGCCCAGC
GTCAGCCTCC TGGCCTGCAT GCTGGCCGAT GGACCGATCG TCGCCACCTT CCACACCGCC
AACCCCCGGT CGCGGTTCCT CACCGCGGCC CAGGGCGCGC TGCAGCCGTC GTTCGAGAAG
CTGCGGGCTC GGATCGCGGT CTCCGAGGCG GCCCGGCGCA CCCTCGTCGA GCATCTGGGC
GCCGACGCCA TCCTGATCCC GAACGGGGTG GCGGTGCAGA ACTTCGCCGG CGCCCGGCCC
CTGCCCGACT ACGACGACGG GCGGCCCACC GTCGTGTTCC TCGGGCGTAT CGACGAGCCG
CGCAAGGGCC TTGACGTGCT GCTCGCCGCC CTGCCTGCGC TCGCCGCCGA GATCGACGGT
GTCCGGCTGC TGGTGGCGGG GCCCGGTGAC GGGGCGGCGG TGCGGGCCCG GCTGGAGCCC
ACCCTGCGCT CGCGGGTCGA CCTCGTCGGC ATGGTCTCCG ACGCTGACAA GCCCCGGGTT
TTCGCCTCCG GGCAGGTCTA CTGCGCCCCG AACACCGGTC AGGAGAGCTT CGGGATCGTG
CTGCTCGAGG CGATGGCGAC CGGGACCCCG GTGGTGGCCA GCGACATCGA CGCCTTCCGC
CGGGTCCTCG ATGACGGGCG CGCCGGCAGG CTGTTCGACG TCGGCGATCC CGCGCGGCTG
GCCGCGACCC TGGCCCAGGT GCTGCGTGAT CCCGCCGGCG CCGCGCGGCT GGTGGAACGC
GGTCGCGCCG TCGTCACCGC CTACGACTGG CGGGCCATCG CCGAGCGGAT CGTCGGGGTG
TACCAGATGG TCTCCGGGGA CATGCGGGTG TCGGTCGCGA CGGCGACGCG GTTGCCGGTC
CGGGGCGACG CGAGGAGTGG TAACTGA
 
Protein sequence
MKIGLACPYA WDVPGGVQAH VRDLAETLIA AGHEVSVITP VDDERTLPPY AVDAGRALPL 
PYNGSVARLL MGPVSAARVR RWLREHDFDV LHAHEPTAPS VSLLACMLAD GPIVATFHTA
NPRSRFLTAA QGALQPSFEK LRARIAVSEA ARRTLVEHLG ADAILIPNGV AVQNFAGARP
LPDYDDGRPT VVFLGRIDEP RKGLDVLLAA LPALAAEIDG VRLLVAGPGD GAAVRARLEP
TLRSRVDLVG MVSDADKPRV FASGQVYCAP NTGQESFGIV LLEAMATGTP VVASDIDAFR
RVLDDGRAGR LFDVGDPARL AATLAQVLRD PAGAARLVER GRAVVTAYDW RAIAERIVGV
YQMVSGDMRV SVATATRLPV RGDARSGN