Gene Francci3_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1362 
Symbol 
ID3904610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1637887 
End bp1638684 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content71% 
IMG OID637878699 
ProductCDP-diacylglycerol inositol 3-phosphatidyltransferase 
Protein accessionYP_480468 
Protein GI86740068 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.724418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.592258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGAT CGTGGCGGCT GTACTGTGAA GACCGCCCGA AGTCGGGCGC ACGCGGGACG 
ACCACGCGGG ACGACGGGAC GGACATGCTC GCTAGCAAGG CACGACCGCA GATCCAGAAG
TTGCTCGACC CGGTGAGCCA GTGGGCCGCC CGGTCGTCGG TGTCGCCGGA TGTCGTGACG
ATCATCGGCA TGGTCGGGGT CGCGGGCGGG GCTCTGGGGT TCTTCACCCG CGGGGTGTTC
TTCCTCGGCA CCGTGGTAGT CACGCTGTTC GTCTTCTCGG ACCTGATCGA CGGGGTCATC
GCCCGCGCCC GCGGCATCTC CTCCAAGTGG GGGGCCTTTC TCGACTCCAC GTCCGACCGG
GTCGGCGACG GCGCGATCTT CGGATCGCTC GTCCTCTGGT ACGCCGGCGA CGGCGATTCC
CTGCCGTTGG CGGGTGCGGC CCTGATCTGC CTGGTCGCCG GGTCGATCAC CTCGTACGTC
AAGGCCCGCG CCGAGGGACT CGGCTTCACC TGTGACGTGG GGTTCGCCGA ACGGGGCGAG
CGGTTGCTGA TCCTGCTGGT CGCCGCCGGG CTGTACGGCC TCGGGGTGCC CTACCTCCTG
CCCGCGGCGC TGTGGTTCCT CGTCGGTGCC ACCACGCTGA CGGTCGTCCA GCGGGTCGTC
CACGTCTACC GGCAGTGGTA CCGTGCGGGG GACCCTCCCT CCCCGTTGAC GTCAAGGGCG
GCCCCGACCA CCGCGTCCCG GACCACGGCT GCGTCCCGGA GCGCGACCAC CTTCGGCCCC
GGCCGCAACG GCCGCTGA
 
Protein sequence
MRGSWRLYCE DRPKSGARGT TTRDDGTDML ASKARPQIQK LLDPVSQWAA RSSVSPDVVT 
IIGMVGVAGG ALGFFTRGVF FLGTVVVTLF VFSDLIDGVI ARARGISSKW GAFLDSTSDR
VGDGAIFGSL VLWYAGDGDS LPLAGAALIC LVAGSITSYV KARAEGLGFT CDVGFAERGE
RLLILLVAAG LYGLGVPYLL PAALWFLVGA TTLTVVQRVV HVYRQWYRAG DPPSPLTSRA
APTTASRTTA ASRSATTFGP GRNGR