Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1360 |
Symbol | |
ID | 3904608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1634830 |
End bp | 1635408 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637878697 |
Product | histidine triad (HIT) protein |
Protein accession | YP_480466 |
Protein GI | 86740066 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.529345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGCCG AGCTCTCACC CGAGGGGGTT CCCCTGGAGG AGCAGGCGGG GGTCGGCGGT CCGGATGCTT TCCAGCGGCT CTACACCCCG CATCGCATGG CTTATATCAG GGGTGAGGGC CGCTCCCGTG ACGATGAATG CCCATTCTGC TCCATTGTCG GGATGTCCGA CGAGGACGGC CTCGTGGTTG CCCGGGGTAA AAGCGTCTAC GCGGTCCTCA ACCTGTACCC CTACAATGCC GGACACCTTC TCGTCGTGCC CTATCGCCAC GTCGCGGACT ACGCCGACAT GGACCCCGAA GAGATCGTCG AGATGGCATT CTTCGTTCAG CACGCGCTCC GTGCGCTGCG GGCCGCCAGC GGGGCCCACG GGTTCAACAC CGGCATGAAC CTGGGGGATG TCGCCGGCGC CGGGATCGCC TCGCACGTGC ATCAGCACGT GGTGCCGCGG TGGGGCGGTG ACACGAACTT CATGCCCGTG GTGGGCGCGA CCAGGGTGCT GCCCGCCCTG CTCGGGCAGA CCAGGCAGAT GCTCGCCCAG GCCTGGGCGC AGACCGCGTC CGACGAGCAG GGCGGATAG
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Protein sequence | MTAELSPEGV PLEEQAGVGG PDAFQRLYTP HRMAYIRGEG RSRDDECPFC SIVGMSDEDG LVVARGKSVY AVLNLYPYNA GHLLVVPYRH VADYADMDPE EIVEMAFFVQ HALRALRAAS GAHGFNTGMN LGDVAGAGIA SHVHQHVVPR WGGDTNFMPV VGATRVLPAL LGQTRQMLAQ AWAQTASDEQ GG
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