Gene Francci3_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1360 
Symbol 
ID3904608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1634830 
End bp1635408 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content68% 
IMG OID637878697 
Producthistidine triad (HIT) protein 
Protein accessionYP_480466 
Protein GI86740066 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.529345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCCG AGCTCTCACC CGAGGGGGTT CCCCTGGAGG AGCAGGCGGG GGTCGGCGGT 
CCGGATGCTT TCCAGCGGCT CTACACCCCG CATCGCATGG CTTATATCAG GGGTGAGGGC
CGCTCCCGTG ACGATGAATG CCCATTCTGC TCCATTGTCG GGATGTCCGA CGAGGACGGC
CTCGTGGTTG CCCGGGGTAA AAGCGTCTAC GCGGTCCTCA ACCTGTACCC CTACAATGCC
GGACACCTTC TCGTCGTGCC CTATCGCCAC GTCGCGGACT ACGCCGACAT GGACCCCGAA
GAGATCGTCG AGATGGCATT CTTCGTTCAG CACGCGCTCC GTGCGCTGCG GGCCGCCAGC
GGGGCCCACG GGTTCAACAC CGGCATGAAC CTGGGGGATG TCGCCGGCGC CGGGATCGCC
TCGCACGTGC ATCAGCACGT GGTGCCGCGG TGGGGCGGTG ACACGAACTT CATGCCCGTG
GTGGGCGCGA CCAGGGTGCT GCCCGCCCTG CTCGGGCAGA CCAGGCAGAT GCTCGCCCAG
GCCTGGGCGC AGACCGCGTC CGACGAGCAG GGCGGATAG
 
Protein sequence
MTAELSPEGV PLEEQAGVGG PDAFQRLYTP HRMAYIRGEG RSRDDECPFC SIVGMSDEDG 
LVVARGKSVY AVLNLYPYNA GHLLVVPYRH VADYADMDPE EIVEMAFFVQ HALRALRAAS
GAHGFNTGMN LGDVAGAGIA SHVHQHVVPR WGGDTNFMPV VGATRVLPAL LGQTRQMLAQ
AWAQTASDEQ GG