| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1357 |
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| Symbol | |
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| ID | 3904601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1629706 |
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| End bp | 1630566 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637878690 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_480463 |
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| Protein GI | 86740063 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.414025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCAC GGATCAGACC ATCGATCCTG CTTCGGATTG TCGGTGCGGC CGCCGTGGCC
CTGGTCGCCG TGGCCCTGGT CGCCGGGGTG GCTCTGCATC TCGTGGTGGG CGGGTCCGCC
GGGGCGGGCG CACCCGGCCC CCGGCCCGGC GTGGACGGGA CCTCACCAAC CGCCCTGTCC
GGCCGGAAGG TCGTTCTCGA TCCCGGGCAC AACGGAGGAA ACGGCGCCGC CGCGGGGTCG
ATCAACCGGC GGGTTCCGGC CGGCGGTTTC GACAAGGAAT GCGACACCGT CGGCGCCGAG
ACCGACAGTG GTTACCCGGA GCACGCCTTC ACCTTCGACG TCGCTGGGCG GGCGGCGGCC
ATTCTGCGCT CCCGGGGCGC GAGCGTGATC CTGACGCGCG ACAACGACTC CGGGGTGGGC
CCGTGCATCG ACGAGCGGGC CCGCATCGGC AACCGGACCT CGGCCGACGC GGTGGTGTCG
ATACATGCCG ACGGGGGACC GGCGGACGGG CGCGGCTTTC ATGTCATCGC GCCCGCGCTC
AGCCCGGACC GGGCCAACGC ACCGATCCTC GCCCCGTCGG CACGTCTTGC GGCGATGGTG
CGATCCGCCT TCGGCCGGGC CACCGGGCAG CCACTGGCGG ACTACCTGGG CGAGGATGGT
ATGACGATCC GCTCCGATCT CGGTGGGCTC AACCTCTCGC GGGTGCCGAA GGTCTTCCTG
GAGTGCGGCA ACATGCGCAA CCGCACCGAT GCGGCCGAGC TCGCCGACCC GGCCTGGCGG
GCCCGGGCGG CGGCGGGCCT TGTGGACGGG ATCACGTCGT TCCTGCTGGG GGACGAGGCG
TCCTCGCCCG GCCCGGGCTG A
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| Protein sequence | MPARIRPSIL LRIVGAAAVA LVAVALVAGV ALHLVVGGSA GAGAPGPRPG VDGTSPTALS
GRKVVLDPGH NGGNGAAAGS INRRVPAGGF DKECDTVGAE TDSGYPEHAF TFDVAGRAAA
ILRSRGASVI LTRDNDSGVG PCIDERARIG NRTSADAVVS IHADGGPADG RGFHVIAPAL
SPDRANAPIL APSARLAAMV RSAFGRATGQ PLADYLGEDG MTIRSDLGGL NLSRVPKVFL
ECGNMRNRTD AAELADPAWR ARAAAGLVDG ITSFLLGDEA SSPGPG
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