Gene Francci3_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1345 
Symbol 
ID3906558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1615008 
End bp1615829 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content74% 
IMG OID637878678 
Producthypothetical protein 
Protein accessionYP_480451 
Protein GI86740051 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.267078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCCCG GAAAGGCCGC GGCGACCACA GACGCCGCAG CGACCACAGA CTCCACGGCC 
GCGGCGGGCG CCGGGCTCGC GAGGAAGGCC ATCGAGGACA TCGAGGCCGT CGAGGACATC
GAGGACATCG ATCTCGACGA GGTGTACGCC TACCCCCCGT CCGCCGCGCA TACCCCCTAC
ATCCGGGCAA ACTTCGTGGC CTCGGTCGAT GGGGCCGCCG AGGTGGGCGG CCGCTCGGGC
CCCCTGGGCG GGGAAGCCGA CCTGCGGGTC TTCCGGTTGC TGCGCTGGCT CAGCGACGTG
GTGCTGGTCG GTGCCGGCAC TGCCCGGACG GAGAACTACG GGCCGGTGGT CATCCCGCCC
GAACGGAGGG AGCGGCGCGT CGCCGCGGGG CTCGCGGCGG TGCCCCCGAT CGCGGTCGTG
ACCGCGACGG CGGGCTTCGA CCCGGGTGCC CGGCTGTTCC GCGGGGAGAT CCGACCGGTG
CTACTGACCT GCGAGACCGC GCCCCTCGAT CGGCGCCGGC GGCTGGCGGC GGTCGCCGAC
ATCGCGATCT GCGGCGGCAG CGCCGTTGAA CCCGACCTCG CCGTCCGGGC CCTGGCGGAA
CGGGGAATGA CCCGCATCCT CACCGAGGGC GGTCCGCTGC TGCACTCCCA GCTCGCCGCG
GCGGGTCTCC TCGACGAGCT GTGCCTGACG ATCGCCCCGG TACTGGCCGG ACCGGGCCGA
CTCGGGATCA TGAAAGGCGA GCCGTGGCCG GCACCGGCCG CGCTCACCCT GACCCAGATC
CTCGCCGAGG ACGACGTCCT GTTCCTGCGT TACCGGCGCT GA
 
Protein sequence
MAPGKAAATT DAAATTDSTA AAGAGLARKA IEDIEAVEDI EDIDLDEVYA YPPSAAHTPY 
IRANFVASVD GAAEVGGRSG PLGGEADLRV FRLLRWLSDV VLVGAGTART ENYGPVVIPP
ERRERRVAAG LAAVPPIAVV TATAGFDPGA RLFRGEIRPV LLTCETAPLD RRRRLAAVAD
IAICGGSAVE PDLAVRALAE RGMTRILTEG GPLLHSQLAA AGLLDELCLT IAPVLAGPGR
LGIMKGEPWP APAALTLTQI LAEDDVLFLR YRR