Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1345 |
Symbol | |
ID | 3906558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1615008 |
End bp | 1615829 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637878678 |
Product | hypothetical protein |
Protein accession | YP_480451 |
Protein GI | 86740051 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.267078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCCCG GAAAGGCCGC GGCGACCACA GACGCCGCAG CGACCACAGA CTCCACGGCC GCGGCGGGCG CCGGGCTCGC GAGGAAGGCC ATCGAGGACA TCGAGGCCGT CGAGGACATC GAGGACATCG ATCTCGACGA GGTGTACGCC TACCCCCCGT CCGCCGCGCA TACCCCCTAC ATCCGGGCAA ACTTCGTGGC CTCGGTCGAT GGGGCCGCCG AGGTGGGCGG CCGCTCGGGC CCCCTGGGCG GGGAAGCCGA CCTGCGGGTC TTCCGGTTGC TGCGCTGGCT CAGCGACGTG GTGCTGGTCG GTGCCGGCAC TGCCCGGACG GAGAACTACG GGCCGGTGGT CATCCCGCCC GAACGGAGGG AGCGGCGCGT CGCCGCGGGG CTCGCGGCGG TGCCCCCGAT CGCGGTCGTG ACCGCGACGG CGGGCTTCGA CCCGGGTGCC CGGCTGTTCC GCGGGGAGAT CCGACCGGTG CTACTGACCT GCGAGACCGC GCCCCTCGAT CGGCGCCGGC GGCTGGCGGC GGTCGCCGAC ATCGCGATCT GCGGCGGCAG CGCCGTTGAA CCCGACCTCG CCGTCCGGGC CCTGGCGGAA CGGGGAATGA CCCGCATCCT CACCGAGGGC GGTCCGCTGC TGCACTCCCA GCTCGCCGCG GCGGGTCTCC TCGACGAGCT GTGCCTGACG ATCGCCCCGG TACTGGCCGG ACCGGGCCGA CTCGGGATCA TGAAAGGCGA GCCGTGGCCG GCACCGGCCG CGCTCACCCT GACCCAGATC CTCGCCGAGG ACGACGTCCT GTTCCTGCGT TACCGGCGCT GA
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Protein sequence | MAPGKAAATT DAAATTDSTA AAGAGLARKA IEDIEAVEDI EDIDLDEVYA YPPSAAHTPY IRANFVASVD GAAEVGGRSG PLGGEADLRV FRLLRWLSDV VLVGAGTART ENYGPVVIPP ERRERRVAAG LAAVPPIAVV TATAGFDPGA RLFRGEIRPV LLTCETAPLD RRRRLAAVAD IAICGGSAVE PDLAVRALAE RGMTRILTEG GPLLHSQLAA AGLLDELCLT IAPVLAGPGR LGIMKGEPWP APAALTLTQI LAEDDVLFLR YRR
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