Gene Francci3_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1333 
Symbol 
ID3906605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1600477 
End bp1600947 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content69% 
IMG OID637878666 
Producthypothetical protein 
Protein accessionYP_480439 
Protein GI86740039 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00349105 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACACC TCAGTGTCAT CTGCTACGCC GTCTGCTACT ACACCGTCTG CTACTACACC 
GTCTGCTACG ACGCCATCTG CTACGACGAG GAGTCACCGA TGACCGGTCG TGCCCCGAGC
GGCGCCTTCC AGCCCCTTGC CCTGGCCCGC GTCGTCTCGC TCGCCGAGGC GTCGTCCTTC
CTTCTGCTGC TCGTCGCGAC CGCGATCAAA TACGGTGCCG GCTACCCGAT CGGCGTGCGG
ATCCTCGGCC CGATCCACGG CGTGCTCTTC CTCACCTATT GCGCCCTCAT CGGCTACCTC
TCGATGGTCG GGCGCTGGCG CCGTAAGCGG ACCGTACTCG CGCTGATCGC CGCGGTGCTG
CCTGTCGCCC CGTTCTTCGT CGAGCGGCAC TGGCTGCGCG GCGACGCCGT CCGGCTGGGC
AACGCGGAGC CGGCACGCCC CACCTCGAAG CCGGCCGGCC AGGCGGGCTG A
 
Protein sequence
MEHLSVICYA VCYYTVCYYT VCYDAICYDE ESPMTGRAPS GAFQPLALAR VVSLAEASSF 
LLLLVATAIK YGAGYPIGVR ILGPIHGVLF LTYCALIGYL SMVGRWRRKR TVLALIAAVL
PVAPFFVERH WLRGDAVRLG NAEPARPTSK PAGQAG