Gene Francci3_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1332 
Symbol 
ID3906604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1599146 
End bp1599799 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content74% 
IMG OID637878665 
Producthypothetical protein 
Protein accessionYP_480438 
Protein GI86740038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00477709 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGTCG CGCAGTCATC CGAGGCGAGC CCTCCGATCT TCCTCGCGGT CACCGACGCC 
CTGCGCGCGG GGATCGCGCG GCTACGCCCG GAGGTGGCGG TGCACGAGGT GGCGGCACCC
ACCCGGGTCG CGCCGTTCTC CTTCGCTCTG GCCGGCGGGC TGACCGGGGA CGAGGCCGAC
ACCGCGGCCG GCCGGCTCAT CCTGCTCATG GATCCCCAGG GACAGCCGGC CTGGCAGGGC
ACGGCCCGCA TCGTCTGCTA CGCCCGCGCG AGCATCGACC GGGAGATCGC CGGCGATCCC
CTGCTCGCCG AGGTCGCCTG GTCGTGGCTG CGGGAATCAT TGGAGGCGCA CGGCGCGGGC
GTGCGCGCCC TGGGCGGCAC GGTCACGGCC ACCGCGTCAC AACGCTTCGG TGTGCTCGCG
GCCGACGGGG ACAGTTTCGA CGTGGAGCTG CGCTGCTCCT GGTCACCCGA CTGGGCGGAG
ACCGCCCTCG CATCCGACCG CGGCCCCGCG GGGCCGGACA CGCAGGGCCG GCTGCCTTGG
AGCGCCTCGG CGACGGTCGC CCACCTGCTC GCGTTCGGGG ACCTGCTCGC GGCCATGGCC
GGGCTTCCCC CACAACTGTC CGGAGTCATC ACGCTACCAA CTCGCCGGAG TTGA
 
Protein sequence
MGVAQSSEAS PPIFLAVTDA LRAGIARLRP EVAVHEVAAP TRVAPFSFAL AGGLTGDEAD 
TAAGRLILLM DPQGQPAWQG TARIVCYARA SIDREIAGDP LLAEVAWSWL RESLEAHGAG
VRALGGTVTA TASQRFGVLA ADGDSFDVEL RCSWSPDWAE TALASDRGPA GPDTQGRLPW
SASATVAHLL AFGDLLAAMA GLPPQLSGVI TLPTRRS