Gene Francci3_1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1327 
Symbol 
ID3906599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1592247 
End bp1593230 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content73% 
IMG OID637878660 
Producthypothetical protein 
Protein accessionYP_480433 
Protein GI86740033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.299611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.976548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGCGC GCCAGGGCGC CGCCTCCCGC CGCCGGGCTG GGCACGGCCC ACGCTGGTGG 
GCCGTGCGTG GTGCGCTTCT GGTGGCCCTC GGGCTACTGG TTCTCGCCAT GGTCAGCCAG
TGGAACGAGA TCGAGGAGTC CGTCCGCTCG CTCACCGTGG GCGGCGTGGT GGCCTCGGGT
GTGGTCACCG TGCTTGCCGT CGGTACCACC GTGTTGTCCT GGCGGGCGTT GCTGGGGGGG
TTGGGCGCCG CGCTTCCCCT GCGGGCCGCC GTGCGGATCT TCTTCGTCGG GCAGATCGGC
AAATATATCC CGGGCAGCGT GTGGCCGGTG CTCGCGCAGA TGGAGCTCTC CCGCGACCAC
GGCGTCTCCC GGCCGAAGGC GGCTTCGGCG AGCCTGGTCG TGTTGGCGCT CGCGGTGCCG
AGCGGGGGGC TCGCCGCGGC GGTCACCCTG CCGTTCGTCT CCGCGCAGGC GCTCGCCGAC
TACTGGTGGG CGCTGGCGGT CGTGCCCGTC TTCGTCGTCG TGCTCTGTCC CCCGGTGCTG
TCCCGCCTGC TGGCGCTGGC ATTCCGGCTG CTGCGCCGCC CACCGCTGAC CGAACCGCTG
CCCCCGCGGG CCGTCGCCGC CGGAGCCGGC TGGTTGCTGC TCAGCTTCTG CTGCTACGGG
GTGGCGACCT GGCTGCTCGT CCGGGATCTG CATCCGGCGG TCGGTGGCGG CCGGCTGTTG
CTGCTCTCCC TCGGGGCCTA TGCCCTGGCC TGGACCGCCG GATTTCTGGT ACTGGTGCTG
CCCGCCGGGG CGGGGGTGCG GGAGGCGGTG CTGGTGCTGG CGCTGGCGCC GGCGGTCGCC
AGCGGGCCGG CGACCCTGGT CGCGTTGGTG GCGCGGCTTC TCGCCACGAT CGCCGACCTG
GTCTGGGCGC TCGTCGGTGT CGCCCTACGG CAGCGGGGTG CTCGGCTGTT GTGTACTGAT
GATGCGATGC AGGAGCGAAT GTGA
 
Protein sequence
MSARQGAASR RRAGHGPRWW AVRGALLVAL GLLVLAMVSQ WNEIEESVRS LTVGGVVASG 
VVTVLAVGTT VLSWRALLGG LGAALPLRAA VRIFFVGQIG KYIPGSVWPV LAQMELSRDH
GVSRPKAASA SLVVLALAVP SGGLAAAVTL PFVSAQALAD YWWALAVVPV FVVVLCPPVL
SRLLALAFRL LRRPPLTEPL PPRAVAAGAG WLLLSFCCYG VATWLLVRDL HPAVGGGRLL
LLSLGAYALA WTAGFLVLVL PAGAGVREAV LVLALAPAVA SGPATLVALV ARLLATIADL
VWALVGVALR QRGARLLCTD DAMQERM