Gene Francci3_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1319 
Symbol 
ID3906591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1582432 
End bp1583145 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID637878652 
Producthypothetical protein 
Protein accessionYP_480425 
Protein GI86740025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.268962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.46056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGGAC GAGGACGTAG GGAGTTCGAC CGTCGCGGGG CCTCCGAGAT GGACGTCCCC 
GAGAAGGTCA CCTCGCGGGG CTCGTCGGAG CCCGATGGTC CCTACGACAT CGCGCAGGCA
CCCGATGACG ACGTGCATCG CCTCGATCTC GGGTCGTTGC GGATTCCGGC GCTCGACGGC
ATGCAGGTGC AGTTCCAGGT CGAGGAGTCG ACCGGCAAGC CGCTGACGGT GCTGGTGACC
GACGGGCGCA GCGCGATGGA GCTCTCCGTC TTCGCGGCGC CGAAGAGCCG GGGCCTGTGG
GACGAGGTGC GGGCCGAGAT CCTGGAGACC ATTCAGGGGG GCGGTGGGTC GGAGGCGGAC
GGTCGCTACG GCCCCGAACT GCGGATGAGC TTGCCGACCG GGCGGCCGGG CGAGACCGTG
CCGGGCCGGA TGATCGGTGT GGACGGTCCG CGCTGGTTTC TGCGGGCGGT GGTGACTGGC
GCGGCCGGAC AGGATCCGGC GGCCGGCCCC CTCCTGGACG CCGCGTTGCG CAATCTGATC
ATTTCTCGTG GTGACGGCGC GATGCCGGTG CGGGATCCGT TGCCCCTGAG GCTGCCTAAA
GAGATCACCG ATCACCCCGA TCACCCCGAT GGTTCCGGCG GACCGGTCGC CTCGGCGACC
AGCGGACGGC CCGAGATGCC CGTGCGCGGT GCGCGTATAG CCGAGATCCG CTGA
 
Protein sequence
MFGRGRREFD RRGASEMDVP EKVTSRGSSE PDGPYDIAQA PDDDVHRLDL GSLRIPALDG 
MQVQFQVEES TGKPLTVLVT DGRSAMELSV FAAPKSRGLW DEVRAEILET IQGGGGSEAD
GRYGPELRMS LPTGRPGETV PGRMIGVDGP RWFLRAVVTG AAGQDPAAGP LLDAALRNLI
ISRGDGAMPV RDPLPLRLPK EITDHPDHPD GSGGPVASAT SGRPEMPVRG ARIAEIR