| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1315 |
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| Symbol | |
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| ID | 3906587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1579055 |
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| End bp | 1580437 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637878648 |
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| Product | major facilitator transporter |
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| Protein accession | YP_480421 |
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| Protein GI | 86740021 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.629045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.701373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCA CGCTGGAAGG CGTCCCGACT ACCGGCACCG TGACCGGTCC GTCCCGACGC
GGCCACTGGA TCGACGACTG GCGGCCCGAG GACCGCACCT TCTGGAACAA CGGCGGTTCC
CGCATCGCCC GCCGAAACCT GATCTTCTCG ATCCTGGCCG AGCACATCGG GTTCTCGATC
TGGTCGCTGT GGGCGGTGAC GGTCCTGTTC CTCGGACCGG CCTACCACAT CGACCCGGCC
GGCAAGTTCC TGTTGACCTC GCTGCCCGCG CTCGTCGGCA GTGCGCTGCG GATCCCCTAC
ACCTTCGCCG TCGCCCGGTT CGGGGGGCGT AACTGGACCA TCTTCAGCGC GGCGTTGCTC
CTCGTGCCGA CGATCCTCGC GGCCGTCGTT CTCTCCCCCG GCGTCTCCTA CCCCACCCTG
CTGATCGTCG CCGCGGTCGC GGGGGTCGGA GGCGGTAACT TCGCCTCCTC GATGACCAAC
ATCAACGCTT ACTACCCGGA GCGGCTGAAG GGCTGGGCCC TGGGGCTGAA CGCCGGCGGC
GGAAACCTGG GGGTGGCCGC GATCCAGCTT GTCGGCCTGC TCGTCCTCGC CACCGCCGGC
AAGGACCACC CCCGGGTCGT CCTTGCCGTC TACATCCCGC TGATCGTCCT GGTGACGCTC
GGCGCGGCGC TGTTCATGGA CAACCTGTCG AGCGCGAAGA ACGACCGGGG GGCGATGCGC
GACGTCGCCC GTGACGGTCA CACCTGGGTG ATATCGCTGC TCTACATCGG CACGTTCGGG
TCGTTCATCG GGTTCGGCTT CGCGTTCGGC CAGGTGCTCC AGGTGCAGTT CCACGACCAG
TTCAGCACCC CGATCAAGGC CGCCTACCTG ACCTTCCTCG GTCCGCTGCT CGGCTCGCTG
ATCCGCCCGG CCGGCGGCAT CCTGGCGGAC CGCGTCGGCG GAGCGAAGGT CACCTTCGTC
AACTTCGTGG CGATGGCGGC CGCGGCCGCG ATCGTGCTCG TCGCCTCGCT GACGGAGTCG
CTTCCTCTGT TCCTGGTCGG GTTCATCGCG CTGTTCGTCT TCAGTGGCGT CGGGAACGGG
TCGACGTACA AGATGATCCC GGCGATCTTC CGGGCGAAGG CCCAGGCCAG CATCGACGCC
GGTGGCGACC CGGTCGCGGC GCAGCACTCG GCCCGGCGGC TGTCCGGAGC CCTCATCGGC
CTGGCCGGCG CGATCGGCGC GTTCGGCGGG GTGCTGGTGA ACCTGGCCTT CCGGCAGTCG
TTCCTGAGCT ACCGGACCGG CAACGCGGCG TACATCTCCT TCATCGCCTT CTACGCGCTG
TGCTTCGTGG TGACCTGGTT CGTGTATCTG CGGCCCTCGG CCAGGCGTCT TGCCGGCATC
TGA
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| Protein sequence | MSATLEGVPT TGTVTGPSRR GHWIDDWRPE DRTFWNNGGS RIARRNLIFS ILAEHIGFSI
WSLWAVTVLF LGPAYHIDPA GKFLLTSLPA LVGSALRIPY TFAVARFGGR NWTIFSAALL
LVPTILAAVV LSPGVSYPTL LIVAAVAGVG GGNFASSMTN INAYYPERLK GWALGLNAGG
GNLGVAAIQL VGLLVLATAG KDHPRVVLAV YIPLIVLVTL GAALFMDNLS SAKNDRGAMR
DVARDGHTWV ISLLYIGTFG SFIGFGFAFG QVLQVQFHDQ FSTPIKAAYL TFLGPLLGSL
IRPAGGILAD RVGGAKVTFV NFVAMAAAAA IVLVASLTES LPLFLVGFIA LFVFSGVGNG
STYKMIPAIF RAKAQASIDA GGDPVAAQHS ARRLSGALIG LAGAIGAFGG VLVNLAFRQS
FLSYRTGNAA YISFIAFYAL CFVVTWFVYL RPSARRLAGI
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