Gene Francci3_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1312 
Symbol 
ID3904361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1572185 
End bp1574968 
Gene Length2784 bp 
Protein Length927 aa 
Translation table11 
GC content70% 
IMG OID637878645 
Productaconitase 
Protein accessionYP_480418 
Protein GI86740018 
COG category[C] Energy production and conversion 
COG ID[COG1048] Aconitase A 
TIGRFAM ID[TIGR01341] aconitate hydratase 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0948394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.862178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCT TCGGCAGTAC CGGATCGCTC GTGGTGGGTG ATCGCACCTA CACGATCAGG 
CGGCTGGACG CGGTGCCCGG GGCCGATCGA CTCCCCTACA GCCTCAAGGT GCTGTTGGAG
AACCTTCTGC GTACCGAGGA CGGCGCGAAC ATCACCGCGG ACCACGTCCG GGCGCTGGCG
AACTGGGATC CCTCGGCCGC CCCCAGCCAG GAGATCCAGT TCACGCCCGC CCGCGTCATC
ATGCAGGACT TCACCGGTGT GCCGTGTGTG GTGGACCTTG CCGCCATGCG GGAGGCGATG
GCCGCCCTCG GCGGCGACCC ATCGAAGATC AATCCGCTGG CCCCCGCCGA GCTCGTGATC
GACCACTCGA TCATCGCCGA CCACTTCGGC CGGCCGGACG CGTTCGAGCT CAACGCGGCG
CTGGAGTTCG GCCGCAACCG GGAGCGTTAC CAGTTCCTGC GCTGGGGTCA GGAGGCGTTC
GACAACTTCA CCGTCGTCCC GCCGAACACC GGCATCGTGC ACCAGGTCAA CCTGGAGCAC
CTCGCCCGGG TCGTCTTCAC GAAGCAGACG GCCGATGGGA CGCTGGCCTA CCCCGACACC
CTCGTGGGCA CGGACAGCCA CACCACGATG ATCAACGGTC TCGGCGTGCT CGGCTGGGGC
GTCGGCGGCA TCGAGGCCGA GGCCGCCATG CTCGGCCAGC CGGTGAGCAT GCTTATCCCC
ACTGTGGTGG GCTTCAAGCT GACCGGCGAG CTGCCGACGG GCACCACCGC GACCGACATG
GTGCTCGTCA TTACCGAGAT GCTGCGTCGG CACGGCGTCG TCGGCCGGTT CGTCGAGTTC
TACGGCGACG GCGTGACGAA CGTCCCGCTG GCGAACCGGG CGACCATCGG CAATATGAGC
CCCGAGTACG GCTCCACCTG CGCGATCTTC CCGATCGACG CGGAGACACT GAACTACCTC
AGGCTGACCG GCCGTCCCGC GGAGCTGGTG GCGTTGGTCG AGGCGTACGC CAAGGAGCAG
GGCCTCTGGC ACGACCCGAG CCGCGAGGCC GCTTACACGA CCACCCTTGA GCTGGACCTG
TCCACCGTCG AGCCGTCGCT TGCCGGGCCC AAGCGCCCGC AGGACCGGGT GCCGCTGGCG
AGCGCGAAGC AGGCCTTCCG GGCGGCGTTG GTCGACTACG CCCAGCCCCT GGTGCTCACG
AACGGCGGCG CGGACGAGGC GGATGCCGAG TCCTTCCCGG CCTCCGACCC GGCGGCCGCA
TTCGCCGACA AGCCCTCCGA CGCCCCGATC TCGGTGAACG CCGTGGTCGG GGACGTCGCC
GCCCGCCCGT CCAACCCGAC GGCGGTCACC CTCGCCGACG GCACGGGCGT CGAGATCGAC
CACGGCGCCG TCGCCGTCGC GGCCATCACC TCCTGCACCA ACACGTCCAA CCCGCAGGTC
ATGATCGGCG CTGCCCTGCT GGCCCGCAAC GCCGTCGAGA AGGGGCTCAC CCGCAAGCCG
TGGGTGAAGA CCACCCTCGC GCCGGGCTCG AAGGTGGTCA TGGACTACTA CGAGCGGGCG
GGGCTCGTGC CCTACCTGGA CAAGGTCGGC TTCAACCTGG TCGGGTTCGG CTGCACCACC
TGCATCGGTA ACTCCGGGCC GCTGCCGGAG GAGATCAGTG CCGCGGTGAA CGACGCGGAC
CTGGCGGTGG TCAGCGTGCT GTCGGGCAAC CGCAACTTCG AGGGCCGGAT CAACCCCGAC
ATCAAGATGA ACTACCTGGC GTCCCCGCCG CTGGTGGTCG CCTACGCGCT GGCCGGCACC
ATGGACATCA ACCTCGACAC CGACCCGCTG GGCACCGGCA CCGGCGGGGA GCCCGTCTAC
CTGCGTGACA TCTGGCCGAG CGAGGCCGAG GTCGCCGCGG TCGTCGGCGA CGCCATCCAG
TCCGAGATGT ACGAGTCCGA CTACGCCGAC CTGTCCGGTG ACGAGCGCTG GCGTTCGCTG
CCGCTCGGTG ATGGCGGGGA GGTGTCGCGG ACGTTCGCCT GGGCGCCCGA CTCCACCTAC
GTCCGGCACC CTCCGTACTT CGAGGGGATG GCGGCGAAGC CGGAGGCCCG GACCGACATC
ATCGACGCCC GGGTGCTGGC GGTGCTCGGC GACTCGGTCA CCACCGACCA CATCTCCCCG
GCTGGTTCGA TCAAGAAGGA CTCGCCTGCC GGCCGCTACC TCACCGAGCA CGGGGTCGCG
CCCGCCGACT TCAACTCCTA CGGGTCGCGG CGCGGCAACC ACGAGGTGAT GATCCGCGGC
ACGTTCGCCA ACATCCGGTT GCGCAACCGG CTGGCGCCGG GCACCGAGGG CGGCGTCACC
CGGCACCTGC CAGACGGCGA GCAGCTGGCC ATCTACGACG CCGCGCAGAA ATACGCCGCC
GAGGGTGTGC CGCTGGTGAT CCTGGCTGGT AAGGAGTACG GCTCGGGTTC CTCCCGGGAC
TGGGCGGCGA AGGGTACCTC GCTGCTCGGC GTGCGGGCGG TCATCGCCGA GTCCTACGAG
CGCATCCACC GGTCGAATCT GATCGGTATG GGCGTGCTGC CGCTGCAGTT CCCCGCCGGC
GAGTCGGTGG AGTCGCTCGG CCTGACCGGG GAGGAGACGT TCACCATCAC GGGCCTCGCC
GAGGTGGACG AGAGGACCCC GCCCATCACG GTACGTGCCG GCGACAAGAC CTTCGAGGCG
GTCGTGCGGA TCGACACCCC CGGCGAGGCG GAGTACTACC GCCACGGCGG GATCCTGCTG
TACGTCCTGC GCTCGTTGCT GTAG
 
Protein sequence
MDTFGSTGSL VVGDRTYTIR RLDAVPGADR LPYSLKVLLE NLLRTEDGAN ITADHVRALA 
NWDPSAAPSQ EIQFTPARVI MQDFTGVPCV VDLAAMREAM AALGGDPSKI NPLAPAELVI
DHSIIADHFG RPDAFELNAA LEFGRNRERY QFLRWGQEAF DNFTVVPPNT GIVHQVNLEH
LARVVFTKQT ADGTLAYPDT LVGTDSHTTM INGLGVLGWG VGGIEAEAAM LGQPVSMLIP
TVVGFKLTGE LPTGTTATDM VLVITEMLRR HGVVGRFVEF YGDGVTNVPL ANRATIGNMS
PEYGSTCAIF PIDAETLNYL RLTGRPAELV ALVEAYAKEQ GLWHDPSREA AYTTTLELDL
STVEPSLAGP KRPQDRVPLA SAKQAFRAAL VDYAQPLVLT NGGADEADAE SFPASDPAAA
FADKPSDAPI SVNAVVGDVA ARPSNPTAVT LADGTGVEID HGAVAVAAIT SCTNTSNPQV
MIGAALLARN AVEKGLTRKP WVKTTLAPGS KVVMDYYERA GLVPYLDKVG FNLVGFGCTT
CIGNSGPLPE EISAAVNDAD LAVVSVLSGN RNFEGRINPD IKMNYLASPP LVVAYALAGT
MDINLDTDPL GTGTGGEPVY LRDIWPSEAE VAAVVGDAIQ SEMYESDYAD LSGDERWRSL
PLGDGGEVSR TFAWAPDSTY VRHPPYFEGM AAKPEARTDI IDARVLAVLG DSVTTDHISP
AGSIKKDSPA GRYLTEHGVA PADFNSYGSR RGNHEVMIRG TFANIRLRNR LAPGTEGGVT
RHLPDGEQLA IYDAAQKYAA EGVPLVILAG KEYGSGSSRD WAAKGTSLLG VRAVIAESYE
RIHRSNLIGM GVLPLQFPAG ESVESLGLTG EETFTITGLA EVDERTPPIT VRAGDKTFEA
VVRIDTPGEA EYYRHGGILL YVLRSLL