Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1312 |
Symbol | |
ID | 3904361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1572185 |
End bp | 1574968 |
Gene Length | 2784 bp |
Protein Length | 927 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637878645 |
Product | aconitase |
Protein accession | YP_480418 |
Protein GI | 86740018 |
COG category | [C] Energy production and conversion |
COG ID | [COG1048] Aconitase A |
TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0948394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.862178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCT TCGGCAGTAC CGGATCGCTC GTGGTGGGTG ATCGCACCTA CACGATCAGG CGGCTGGACG CGGTGCCCGG GGCCGATCGA CTCCCCTACA GCCTCAAGGT GCTGTTGGAG AACCTTCTGC GTACCGAGGA CGGCGCGAAC ATCACCGCGG ACCACGTCCG GGCGCTGGCG AACTGGGATC CCTCGGCCGC CCCCAGCCAG GAGATCCAGT TCACGCCCGC CCGCGTCATC ATGCAGGACT TCACCGGTGT GCCGTGTGTG GTGGACCTTG CCGCCATGCG GGAGGCGATG GCCGCCCTCG GCGGCGACCC ATCGAAGATC AATCCGCTGG CCCCCGCCGA GCTCGTGATC GACCACTCGA TCATCGCCGA CCACTTCGGC CGGCCGGACG CGTTCGAGCT CAACGCGGCG CTGGAGTTCG GCCGCAACCG GGAGCGTTAC CAGTTCCTGC GCTGGGGTCA GGAGGCGTTC GACAACTTCA CCGTCGTCCC GCCGAACACC GGCATCGTGC ACCAGGTCAA CCTGGAGCAC CTCGCCCGGG TCGTCTTCAC GAAGCAGACG GCCGATGGGA CGCTGGCCTA CCCCGACACC CTCGTGGGCA CGGACAGCCA CACCACGATG ATCAACGGTC TCGGCGTGCT CGGCTGGGGC GTCGGCGGCA TCGAGGCCGA GGCCGCCATG CTCGGCCAGC CGGTGAGCAT GCTTATCCCC ACTGTGGTGG GCTTCAAGCT GACCGGCGAG CTGCCGACGG GCACCACCGC GACCGACATG GTGCTCGTCA TTACCGAGAT GCTGCGTCGG CACGGCGTCG TCGGCCGGTT CGTCGAGTTC TACGGCGACG GCGTGACGAA CGTCCCGCTG GCGAACCGGG CGACCATCGG CAATATGAGC CCCGAGTACG GCTCCACCTG CGCGATCTTC CCGATCGACG CGGAGACACT GAACTACCTC AGGCTGACCG GCCGTCCCGC GGAGCTGGTG GCGTTGGTCG AGGCGTACGC CAAGGAGCAG GGCCTCTGGC ACGACCCGAG CCGCGAGGCC GCTTACACGA CCACCCTTGA GCTGGACCTG TCCACCGTCG AGCCGTCGCT TGCCGGGCCC AAGCGCCCGC AGGACCGGGT GCCGCTGGCG AGCGCGAAGC AGGCCTTCCG GGCGGCGTTG GTCGACTACG CCCAGCCCCT GGTGCTCACG AACGGCGGCG CGGACGAGGC GGATGCCGAG TCCTTCCCGG CCTCCGACCC GGCGGCCGCA TTCGCCGACA AGCCCTCCGA CGCCCCGATC TCGGTGAACG CCGTGGTCGG GGACGTCGCC GCCCGCCCGT CCAACCCGAC GGCGGTCACC CTCGCCGACG GCACGGGCGT CGAGATCGAC CACGGCGCCG TCGCCGTCGC GGCCATCACC TCCTGCACCA ACACGTCCAA CCCGCAGGTC ATGATCGGCG CTGCCCTGCT GGCCCGCAAC GCCGTCGAGA AGGGGCTCAC CCGCAAGCCG TGGGTGAAGA CCACCCTCGC GCCGGGCTCG AAGGTGGTCA TGGACTACTA CGAGCGGGCG GGGCTCGTGC CCTACCTGGA CAAGGTCGGC TTCAACCTGG TCGGGTTCGG CTGCACCACC TGCATCGGTA ACTCCGGGCC GCTGCCGGAG GAGATCAGTG CCGCGGTGAA CGACGCGGAC CTGGCGGTGG TCAGCGTGCT GTCGGGCAAC CGCAACTTCG AGGGCCGGAT CAACCCCGAC ATCAAGATGA ACTACCTGGC GTCCCCGCCG CTGGTGGTCG CCTACGCGCT GGCCGGCACC ATGGACATCA ACCTCGACAC CGACCCGCTG GGCACCGGCA CCGGCGGGGA GCCCGTCTAC CTGCGTGACA TCTGGCCGAG CGAGGCCGAG GTCGCCGCGG TCGTCGGCGA CGCCATCCAG TCCGAGATGT ACGAGTCCGA CTACGCCGAC CTGTCCGGTG ACGAGCGCTG GCGTTCGCTG CCGCTCGGTG ATGGCGGGGA GGTGTCGCGG ACGTTCGCCT GGGCGCCCGA CTCCACCTAC GTCCGGCACC CTCCGTACTT CGAGGGGATG GCGGCGAAGC CGGAGGCCCG GACCGACATC ATCGACGCCC GGGTGCTGGC GGTGCTCGGC GACTCGGTCA CCACCGACCA CATCTCCCCG GCTGGTTCGA TCAAGAAGGA CTCGCCTGCC GGCCGCTACC TCACCGAGCA CGGGGTCGCG CCCGCCGACT TCAACTCCTA CGGGTCGCGG CGCGGCAACC ACGAGGTGAT GATCCGCGGC ACGTTCGCCA ACATCCGGTT GCGCAACCGG CTGGCGCCGG GCACCGAGGG CGGCGTCACC CGGCACCTGC CAGACGGCGA GCAGCTGGCC ATCTACGACG CCGCGCAGAA ATACGCCGCC GAGGGTGTGC CGCTGGTGAT CCTGGCTGGT AAGGAGTACG GCTCGGGTTC CTCCCGGGAC TGGGCGGCGA AGGGTACCTC GCTGCTCGGC GTGCGGGCGG TCATCGCCGA GTCCTACGAG CGCATCCACC GGTCGAATCT GATCGGTATG GGCGTGCTGC CGCTGCAGTT CCCCGCCGGC GAGTCGGTGG AGTCGCTCGG CCTGACCGGG GAGGAGACGT TCACCATCAC GGGCCTCGCC GAGGTGGACG AGAGGACCCC GCCCATCACG GTACGTGCCG GCGACAAGAC CTTCGAGGCG GTCGTGCGGA TCGACACCCC CGGCGAGGCG GAGTACTACC GCCACGGCGG GATCCTGCTG TACGTCCTGC GCTCGTTGCT GTAG
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Protein sequence | MDTFGSTGSL VVGDRTYTIR RLDAVPGADR LPYSLKVLLE NLLRTEDGAN ITADHVRALA NWDPSAAPSQ EIQFTPARVI MQDFTGVPCV VDLAAMREAM AALGGDPSKI NPLAPAELVI DHSIIADHFG RPDAFELNAA LEFGRNRERY QFLRWGQEAF DNFTVVPPNT GIVHQVNLEH LARVVFTKQT ADGTLAYPDT LVGTDSHTTM INGLGVLGWG VGGIEAEAAM LGQPVSMLIP TVVGFKLTGE LPTGTTATDM VLVITEMLRR HGVVGRFVEF YGDGVTNVPL ANRATIGNMS PEYGSTCAIF PIDAETLNYL RLTGRPAELV ALVEAYAKEQ GLWHDPSREA AYTTTLELDL STVEPSLAGP KRPQDRVPLA SAKQAFRAAL VDYAQPLVLT NGGADEADAE SFPASDPAAA FADKPSDAPI SVNAVVGDVA ARPSNPTAVT LADGTGVEID HGAVAVAAIT SCTNTSNPQV MIGAALLARN AVEKGLTRKP WVKTTLAPGS KVVMDYYERA GLVPYLDKVG FNLVGFGCTT CIGNSGPLPE EISAAVNDAD LAVVSVLSGN RNFEGRINPD IKMNYLASPP LVVAYALAGT MDINLDTDPL GTGTGGEPVY LRDIWPSEAE VAAVVGDAIQ SEMYESDYAD LSGDERWRSL PLGDGGEVSR TFAWAPDSTY VRHPPYFEGM AAKPEARTDI IDARVLAVLG DSVTTDHISP AGSIKKDSPA GRYLTEHGVA PADFNSYGSR RGNHEVMIRG TFANIRLRNR LAPGTEGGVT RHLPDGEQLA IYDAAQKYAA EGVPLVILAG KEYGSGSSRD WAAKGTSLLG VRAVIAESYE RIHRSNLIGM GVLPLQFPAG ESVESLGLTG EETFTITGLA EVDERTPPIT VRAGDKTFEA VVRIDTPGEA EYYRHGGILL YVLRSLL
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