| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1307 |
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| Symbol | |
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| ID | 3904356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1565407 |
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| End bp | 1566498 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637878640 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_480413 |
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| Protein GI | 86740013 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.111837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTCGCG CGCTGATTAC CGGGATTACC GGTCAGGACG GGTTGTATCT GGGTGAGTTG
CTGACCGCGA AGGGTTATGA GGTGTTCGGG TTGGTGCGGG GGCAGTCGAA CCCGAAGGTG
GCGACGGTGG AGCGGCTGGT GCCGGGGGTG GTGTTGTTGG AGGGGGATCT GACGGATCTT
CCGTCGTTGA TCGGGGCGGT GGAGATCTCG CAGCCGGACG AGGTGTACAA CCTGGGGGCG
ATCTCGTTCG TGGGGTTGTC GTGGAAGCAG GCGGAGCTGA CCGGGGAGAC GACGGGGATG
GGGGTGCTGC GGGTTCTGGA GGCGTTGCGG ATCGCGGGTG GTAACGACAT GTCGGGGGTG
CGGTTCTATC AGGCGTCGTC GTCGGAGATG TTCGGGAAGG TGCGGGAGAC GCCGCAGCGG
GAGTCGACGC CGTTTCATCC GCGGTCGCCG TACGGGGTGG CGAAGACGTT TGGTCACTAT
CTGACGGTGA ATTATCGGGA GTCGTACGGG GCGTTCGCGT GTTCGGGGTT GTTGTTTAAT
CACGAGTCGC CGCGGCGGGG GATCGAGTTC GTGACCCGGA AGATCTCGCG GGCGGTGGCG
CGGATTTCGT TGGGGTTGCA GGACTCGTTG TCGTTGGGGA ATCTGGAGTC GCGGCGGGAC
TGGGGTTTCG CGGGGGATTA CGTGGAGGCG ATGTGGCGGA TGCTGCAGCA GGACGCGCCG
GACGATTATG TGGTGGCGAC CGGGGAGACG CACAGTATCC GGGAGTTGTT GGATGTGGCG
TTCGGGCGGG TGGGGATCTC GGACTGGTCG GGGTTCGTGC GGCAGGATCC CCGGTTTTTC
CGGCCGGCTG AGGTGGATGT GCTGGTGGGG GATTCGTCGA AGGCGCGGGA GGTGTTGGGG
TGGAAGCCGC GGGTGGGGTT CGAGGAGTTG GTGGCGATGA TGGTGGACGC CGACGTCGCC
ACCGAGACGG AATCGGCCGC GCGCGACGGG CTCGCGGCCC CCGCCGGGCG GGCTGGGGCG
GCCCGTCCCG CCGGGCCTAC CGTCGTCGAC CAGCCGCGCG GCGGATCGGA TCGTTCCGGG
GTCCGCTCGT GA
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| Protein sequence | MPRALITGIT GQDGLYLGEL LTAKGYEVFG LVRGQSNPKV ATVERLVPGV VLLEGDLTDL
PSLIGAVEIS QPDEVYNLGA ISFVGLSWKQ AELTGETTGM GVLRVLEALR IAGGNDMSGV
RFYQASSSEM FGKVRETPQR ESTPFHPRSP YGVAKTFGHY LTVNYRESYG AFACSGLLFN
HESPRRGIEF VTRKISRAVA RISLGLQDSL SLGNLESRRD WGFAGDYVEA MWRMLQQDAP
DDYVVATGET HSIRELLDVA FGRVGISDWS GFVRQDPRFF RPAEVDVLVG DSSKAREVLG
WKPRVGFEEL VAMMVDADVA TETESAARDG LAAPAGRAGA ARPAGPTVVD QPRGGSDRSG
VRS
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