| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1304 |
|---|
| Symbol | |
|---|
| ID | 3904353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 1560118 |
|---|
| End bp | 1561443 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637878637 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_480410 |
|---|
| Protein GI | 86740010 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCCCCT CTCCTGTCCG GTCGCGCGTC CTGCTGGTGA CGCACTACTT CCCCCCGGAG
ACCGGAGCTC CCCAGTCCCG GTTGTCGGAG ACGGCACGCG CGTGGGCGGC GAACGGGCTC
GACGTCACCG TACTCACCGG CATGCCGAAC CACCCGACGG GCAAGATCCC TGCCGCCTAT
CGCGGCGCCT GGCTGCGGAC CGAGCGGGTC GACGGGTACC GCGTCGTACG CACCTGGCTC
TATGCCACTC CCAACGAGGG GATCGCCCGC AAGACCCTCG GTCATCTGTC GTTCATGGTC
ACCAGCGTCC TGCTCGGCGG CCGGCCCGCC GGCCCGGCCG ACGTGGTGGT GGTGTCCTCG
CCGACCTTCT TTCCCCTCGG CTCGGCCTGG CTGCTCGCCA GGCTGCGCGG CGCCCGGCTG
GTTGTGGAGG TCCGCGACCT GTGGCCGGCC ATCTTCGAGC ACCTCGGCGT CCTCACCGAC
CGGCGGGTCC TCGGCGTTCT CGAACGCCTC GAACTCGCCG CCTACCGGGC CGCCGACGCC
GTTGTCACGG TGACGGAGGG GTTCCGGGAG GACATCGTGC GACGAGGCAT CGCGCCGCGC
AAGGTGCACG TGATTCCCAA CGGCGTGGAC CTCCGCCGGT TCCACCCGAC GACCGCGGCC
TCGGCCGACA TCCGGGCCTG GCTGGGCGCC ACCGACGGCG ACACCCTCGT GCTCTACCTC
GGCGCCCACG GCATCTCGCA CGGACTGACC TCGATCGCCG ACGCGGCCGC CCGGGTGACC
GGCCGGCCGA TCCGGTTCGC CTTCGTCGGT GAGGGGGCCG AGAAACGCAG GCTCGTCGGG
CACGTCGAGA GCCTGGGACT GGCCAACACG GTGCTGCGCG ACGGGGTTGC CCGCGAGGAG
GTACCCGCCG TCGTCGCGAC CGCCGACATC TGCGTTGTCC CACTGCGGGA CGTGCCGATG
TTCGACACGT TCATCCCATC GAAGATGTTC GAGTTCCTCG CCGCGGGCCG CCCGGTGATC
GGGGCGGTCC GCGGCGAGGC GGCCCGGATC CTCCTTGCCG CCGGGCAGAT GGTCGTGCCC
CCCGAGGACT CGGCCGCGCT GGCGGAGGCG ATCCTGGTCC TGGCGGCGGA CCCGGACCGC
CGGGCGCGGA TGGCCCGCGG CGGGCGGGCG CACGTCGAGG CCCACTACGA TCGCGACGAT
CTGGCCCGCC GGTACCAGAC GCTGCTGTTC GACAACGCAC CGTTCCCGGC GCCGCCTCCA
CCGACGACCC TTTCCCCACC GGTGCAGGTA CCTGCACCGG TACCTGCACC GGACGTGGTC
GCATGA
|
|---|
| Protein sequence | MVPSPVRSRV LLVTHYFPPE TGAPQSRLSE TARAWAANGL DVTVLTGMPN HPTGKIPAAY
RGAWLRTERV DGYRVVRTWL YATPNEGIAR KTLGHLSFMV TSVLLGGRPA GPADVVVVSS
PTFFPLGSAW LLARLRGARL VVEVRDLWPA IFEHLGVLTD RRVLGVLERL ELAAYRAADA
VVTVTEGFRE DIVRRGIAPR KVHVIPNGVD LRRFHPTTAA SADIRAWLGA TDGDTLVLYL
GAHGISHGLT SIADAAARVT GRPIRFAFVG EGAEKRRLVG HVESLGLANT VLRDGVAREE
VPAVVATADI CVVPLRDVPM FDTFIPSKMF EFLAAGRPVI GAVRGEAARI LLAAGQMVVP
PEDSAALAEA ILVLAADPDR RARMARGGRA HVEAHYDRDD LARRYQTLLF DNAPFPAPPP
PTTLSPPVQV PAPVPAPDVV A
|
|---|
| |