Gene Francci3_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1285 
Symbol 
ID3905090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1536711 
End bp1537460 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content70% 
IMG OID637878619 
Producthypothetical protein 
Protein accessionYP_480392 
Protein GI86739992 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCCG ATCTGCGGTA CCGCAACGGT GGTAACCCGC CTCTCCTCGA TCTGATCGAC 
ATACCGGCGG GTAAGGCGCT GGATTGTGGG TGCGGAGCCG GGGACAACGC GCGGCTGCTG
CGGGCCCGGG GCTGGCGGGT GACGGGGGTG ACGATTGATC CGTCCGAGCG GGCCGCCGCC
ACGGCCGAGT GCGACCACGT CGAACTCGCT GATCTGAACG CCGGGCTGCC CTTCGTCCCC
GACGGAAGTC ACCAGCTCGT GCTGCTTTCC CACATCCTCG AGCACCTGGC GGATCCGGTG
CCGTTGCTCG TAGAGGCCCG GCGGGCGCTG GCACCCGGCG GCCGGGTCCT GGTGGCGCTG
CCGAACGTGC TGCACTACCG GCAGCGCGCA CTGTTCCTGC GGGGTCGGTT TGAGTACACC
GAGACCGGTC TCATGGACGC TACCCACCTG CGGTTCTACA CTGTCAACTC GGCCCGGCGG
CTGTTGGAGG ACAACGGACT GCGCATCGTC GCCACCGCCA CCACCGGTGG TCTGCCGTGG
TGGCGCACCC GTGAGCTGCT CCCCGGGGAG CTGGTGCGGC GGTGGGATCG TCGCGTTCTG
GACCGGTGGC CGAACATGTT CGGCTGGCAG GCGCTGTTCC TCGCGGCGCC ACAGGTGACG
CGCCGGACCG GCGCATCCGG CGTTGCCGTG GTGCGGCAAC GGTCCGCGCC GTCTGGTGAC
CAGCCCGACT ACGGCCAGCT TGTCCAGTGA
 
Protein sequence
MEADLRYRNG GNPPLLDLID IPAGKALDCG CGAGDNARLL RARGWRVTGV TIDPSERAAA 
TAECDHVELA DLNAGLPFVP DGSHQLVLLS HILEHLADPV PLLVEARRAL APGGRVLVAL
PNVLHYRQRA LFLRGRFEYT ETGLMDATHL RFYTVNSARR LLEDNGLRIV ATATTGGLPW
WRTRELLPGE LVRRWDRRVL DRWPNMFGWQ ALFLAAPQVT RRTGASGVAV VRQRSAPSGD
QPDYGQLVQ