Gene Francci3_1282 details

Gene Information

• Locus tag: Francci3_1282
• Symbol: dnaG
• ID: 3905087
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Frankia sp. CcI3
• Kingdom: Bacteria
• Replicon accession: NC_007777
• Strand: +
• Start bp: 1532181
• End bp: 1534070
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637878616
• Product: DNA primase
• Protein accession: YP_480389
• Protein GI: 86739989
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0358] DNA primase (bacterial type)
• TIGRFAM ID: [TIGR01391] DNA primase, catalytic core

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGGGGGAC GAATCCGTGA CGCCGACGTC GCCCTGGTCC GGGAGCGCTC GCCGATTGCG 
GACGTCGTGG CCGAGCACGT ACAACTGCGT CCGGCGGGGC GTAACGAGCT CGTCGGGCTG 
TGCCCGTTCC ATGACGAGAA GTCACCCTCC TTCTACGTCA ATGCGGCAAC CGGCCTGTTC 
CACTGTTTCG GATGCCAGCA GGGTGGTGAC GTCTACTCCT TCGTGCGGGA GATCGACGGG 
CTGACCTTCC GGGAGGCGGC GGAGCGCCTG GCGCGCCGGG CCGGGGTGGC GCTGACCTAC 
GAGGGCGGTG GGACCACCGA CCGTACGGTG TCCAGCCAGC GGCAGCGGCT GCTGGAGACG 
CACCGGGCGG CCGCCGAATT CTACGCCGAG CAGCTAGAGT CGCAGGCCTC CGCGCGCGCC 
GGCTGGGACT TCCTCGCTGC GCGGGGATTC GATCTCACCA CGGCGGCGCG CTTCGAGGTC 
GGCTACGCCC CGACCGGCTG GGACACCCTC ACTCGGCATC TGCTCGCCCG GCGCTTCACC 
GGCGAGGAGC TGGTGCTCGG GGGGCTGGCC AAACAGGGCG CCCGCGGGGG TCTGATCGAC 
CGTTTCCATC ATCGGCTGAT GTGGCCGATC AGGGATCTCG CCGGTGAGGT GGTCGGCTTC 
GGTGGGAGGC GCCTCGCCGA GGACGACGCC CCGAACGCCG GGCCGAAGTA CCTCAACACG 
CCGGACACGC CGTTGTTCAA GAAGGCGAAC CTGCTCTACG GCGCCGATCT CGCCCGCCGT 
GACATCGCCC GCCGCTACCA GGTCGTGGTG GTCGAAGGCT ATACCGACGT CATGGCCTGC 
CATCTCGCCG GGGTCACCAC GGCCGTGGCG ACCTGTGGCA CCGCCTTCGG CTCCGAGCAC 
GTCGCGGTGG TCCGCCGGCT GCTCATGGAC TCCGACGAGC GTCGCGGTGA AGTGATTTTC 
ACGTTCGACG GCGACGCGGC CGGGCAGAAG GCGGCGCTAC GCGCCTTCGA GCACGAGGAG 
CGCTTCGCCA CCCAGACCTT CGTGGCGGTG GAGCCCTCCG GCCGCGACCC CTGCGAGCTG 
TGGATGAGCG GTGGCGACGG CGCCGTGCGG GATCTGGTGG CCAGCCGGGT GCCGCTGGTC 
GAGTTCGCGA TCCGCGGGGT GCTCGACCGC TACGACCTCA ACACCACCGA GGGCCGGCTC 
GCAGCCTTGG ACGCCGCCGC GCCGCTGGTC AACCGGCTCA AGGACGCCGC GTTGCGGCAC 
CGGTACGCGG TGAACCTGGA CCGCTGGCTG GGTTTCCTCG ACGAGCGGTT CGTGGTGGGC 
CGGGTGGCCG AGCACCGGTC GAGGCAGGGG GGCGAGCGGG CTGGTGCCCG TTCCGCGCCG 
ATGCGCCGGC GCGGGGCGGG GGCCGATGAC GCGGCGGTCA TCGTGGAGCG TGAGGCGCTC 
AAGCTGGCCG TTCAGTATCC CGGGCTGGCG GGCCCGATGT TCGACACGCT GGGTCCGGAG 
ATGTTCACTG TTCCCGCGCA CCGTGCCGTC CGTGACCTCA TCGCCGAGGC CGGTGGGGTG 
TGCGCGGGGC TGGCGAGGTC CGGTGAGGTC ACCACCTGGG TGACCGAGCT GGCCGCGGCG 
GCTTCGGAGG AGGAGCTGCG ACGCTTCGTC ACTGCCCTTG CAGTGGAGAG GGTGCTGTGC 
GACCACGATG TGGATGATCG TTATGTCGAC GAACAGATGT CGCGGGTACA GGAGTTGCAT 
GTGACCCGTC GGATCACGGA CCTGAAGTCG CGTGTGCAGC GGCTCAACGG GGTGACCGAC 
GCCGAGGCCC TTCGCCGTGC GTTCGGCGAG CTGATCGCTT TGGAGCAGCA CAAGCATCAA 
CTCCGGGAGC GGGGCGTAGG TGCCGCGTAA 

 

Protein sequence

MGGRIRDADV ALVRERSPIA DVVAEHVQLR PAGRNELVGL CPFHDEKSPS FYVNAATGLF 
HCFGCQQGGD VYSFVREIDG LTFREAAERL ARRAGVALTY EGGGTTDRTV SSQRQRLLET 
HRAAAEFYAE QLESQASARA GWDFLAARGF DLTTAARFEV GYAPTGWDTL TRHLLARRFT 
GEELVLGGLA KQGARGGLID RFHHRLMWPI RDLAGEVVGF GGRRLAEDDA PNAGPKYLNT 
PDTPLFKKAN LLYGADLARR DIARRYQVVV VEGYTDVMAC HLAGVTTAVA TCGTAFGSEH 
VAVVRRLLMD SDERRGEVIF TFDGDAAGQK AALRAFEHEE RFATQTFVAV EPSGRDPCEL 
WMSGGDGAVR DLVASRVPLV EFAIRGVLDR YDLNTTEGRL AALDAAAPLV NRLKDAALRH 
RYAVNLDRWL GFLDERFVVG RVAEHRSRQG GERAGARSAP MRRRGAGADD AAVIVEREAL 
KLAVQYPGLA GPMFDTLGPE MFTVPAHRAV RDLIAEAGGV CAGLARSGEV TTWVTELAAA 
ASEEELRRFV TALAVERVLC DHDVDDRYVD EQMSRVQELH VTRRITDLKS RVQRLNGVTD 
AEALRRAFGE LIALEQHKHQ LRERGVGAA