| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1281 |
|---|
| Symbol | |
|---|
| ID | 3905086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1530422 |
|---|
| End bp | 1531684 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637878615 |
|---|
| Product | deoxyguanosinetriphosphate triphosphohydrolase-like protein |
|---|
| Protein accession | YP_480388 |
|---|
| Protein GI | 86739988 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0232] dGTP triphosphohydrolase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCAGTG AGTGGTATGA CACCTCGGAC ACGGCCCGTC GGATCGTGGA ACGCCCGAAG
GCCACACCGG CTCAGCGTCG TCCCTTCGCC CGGGACCGAG CCCGGGTGCT GCACTCCAGC
GCGCTGCGCA GGCTGGCGGG AAAAACCCAG GTCGTGGGCC CGCTCGACGA CGACTTCCCG
CGTACCCGGC TGACCCACTC CCTGGAGACC GCCCAGGTGG GCCGGGAGCT CGCCGAGGAA
CTGGGAGCGG ACCCCGACCT GGTCGAGGCG GCGTGCCTCG CGCATGATCT GGGTCATCCC
CCTTTCGGGC ATAACGGCGA GCTGGCGCTT GACGAGGCCG CAGCCGCCTG CGGTGGCTTC
GAGGGCAACG CCCAGAGTCT GCGCGAGCTG ACCAGGCTCG AAGTCAAGAT CGTCGACTGT
GACGGTCGCA GCGCGGGCCT GAACCTTACC CGGGCGACCC TGGACGCGGC GACGAAGTAC
CCGTGGCCGC GCCGCCCTGG GCCCCGGGCG GACAGCACGA AGTTCGGCGC CTACGCCGAC
GACCTGTCCG TGCTCCGCTG GGTCCGGGAG GGCGCACCGG CCGCCCGGCG CTGTATCGAG
ACGCAGATCA TGGACTGGGC GGACGACGTG GCCTATTCGG TGCACGACCT CGAGGACGGG
GTCGTTGCCG GACACATCGA TCTGGCCGCC CTCGACGATT CCGGCCGCCG GGCGGAGCTC
GCCGCCGCGA CCGCCGTCCG CTACCCGGGG CCGTCCGCCG AGGCGGTGGC GGCCGCCCTG
GGCACCCTGC GGTCCCAGCC CTGGTGGGTC CGCTCCGAGA TCACCTCGGC CCGGGGCCAG
GCCGCTCTGC GGGCGATGAC CAGCGAGCTC ATCGCCCGGT TCGCGCACAG CGCGGTCCGT
GCCACCCGGG CGTGCCATCC CGACGGTCCG CTGTGGCGCT ATGGCGCGGA TCTGGTGGTG
GATCCGGACA CCGTGGCCGA GTGCGCGGCG CTCAAGGGGG TCACCGCCTG GTATGTGATG
GAGCGGCCGG GTGCCCGCGC CCGGCAGTCC CGGCAGCGGG AGGTGGTCGC GGAGCTCGTG
GCGATGCTCT CCCGGGGCGC GCCGGACGTG CTCGAGCCGT CGTTGCGCGC GGCCTACCGC
ATGGCCGCTG ACGATGCGGC ACGGCTACGG GTCGTCATCG ACCAGGTGGC GCGTCTGACC
GACGCCAGCG CCGAGCGGCG GTATGCGTTG CTGTGTGGAC GACCGGCGCC GCGGGTCCTG
TGA
|
|---|
| Protein sequence | MVSEWYDTSD TARRIVERPK ATPAQRRPFA RDRARVLHSS ALRRLAGKTQ VVGPLDDDFP
RTRLTHSLET AQVGRELAEE LGADPDLVEA ACLAHDLGHP PFGHNGELAL DEAAAACGGF
EGNAQSLREL TRLEVKIVDC DGRSAGLNLT RATLDAATKY PWPRRPGPRA DSTKFGAYAD
DLSVLRWVRE GAPAARRCIE TQIMDWADDV AYSVHDLEDG VVAGHIDLAA LDDSGRRAEL
AAATAVRYPG PSAEAVAAAL GTLRSQPWWV RSEITSARGQ AALRAMTSEL IARFAHSAVR
ATRACHPDGP LWRYGADLVV DPDTVAECAA LKGVTAWYVM ERPGARARQS RQREVVAELV
AMLSRGAPDV LEPSLRAAYR MAADDAARLR VVIDQVARLT DASAERRYAL LCGRPAPRVL
|
|---|
| |