| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1278 |
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| Symbol | |
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| ID | 3905083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1527621 |
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| End bp | 1529495 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878612 |
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| Product | transketolase |
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| Protein accession | YP_480385 |
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| Protein GI | 86739985 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAACTC CCGTATCCGA GAGCACGGTC GGGACGGCCG ACCTGGAGAC GGTTCGGGAA
CTCGCGCAGC AACTGCGGGT CGACTCGGTG CGCAGCAGCA CCTCGGCGGG TTCCGGGCAT
CCCACCTCGT CGATGTCGGC CGCGGACGTG CTGGCGGTTC TCGTCGCGCG CCACCTTCGG
TACGACTGGG ACAACCCGGC GGACCCGGCG AACGATCATC TGATCTTTTC GAAGGGGCAC
GCATCCCCGC TGATCTACTC CATCTTCAAG GCGGTCGGGG TCGTCGGTGA CGACGAGTTG
ATCAATGGTT ACCGCCGTTT CGGTGAGCGG CTTCAGGGCC ACCCGACGCC TGTCCTGCCG
TGGGTCGACG TCGCGACCGG GTCGCTCGGG CAGGGCCTGC CCGACGGCGT GGGCGTCGCG
CTCGCCGGTA AGTACCTGGA CAAGGTGCCC TACCGGGTCT GGGTGATCTG CGGTGACAGC
GAGATGGCGG AGGGCTCGGT CTGGGAGGCA CTGGACAAGG CCTCCTACTA CAACCTCTCC
AACCTCATCG CGATCGTCGA CGTCAACCGG CTCGGCCAGC GCGGCCCGAC CGAGCTCGGC
TGGGACCTCG ACACCTACGC CAGGCGGGTG GAGTCCTTCG GCGCCCGCGC GGTCGTCGTT
GACGGCCACG ACATCGCCGC GATCGACGCG GTGCTCGCCG ACGCCGAGGA CGTCACCCGG
CCGACCGTCA TCCTCGCCCG CACCCGCAAG GGCGAGGGCT TCTCCGAGAC CGCGGACGTC
GAGGGCTGGC ACGGCAAGCC GTTCCCCGCC GACATGGCCG ACCGCGCCAT CGCCGAGCTC
GGCGGCCTGC GCGACCTGCG GGTTCGCGGT CCGGTGCCGC CCGCGGACCT CCCCCGACCG
GCGCCGGTCG AGCGGCCCGT CATCACACTG CCCACCTACG ATCTCGGCGC CAAGGTGGCG
ACTCGGCGCG CCTACGGCCA GGCGCTCGCC GCGCTCGGAG CCCGCACCGA CGTGGTGGCG
CTCGACGCGG AGGTCAGCAA CTCGACCTAC TCCGAGGACT TCGCCAAGAT CTACCCGGAC
CGCTTCTTCG AGATCTTCAT CGCCGAGCAG CAGCTCGTCG CGGCGGCGGT CGGGCTGTCG
GTGCGTGGCT ACGTGCCCTT CGCCTCCACG TTCGCGGCGT TCTTCTCCCG GGCCTACGAC
TTCATCCGGA TGGCGGCGAT CTCCCAGGCC GACATCCGGC TGTCCGGCAG CCACGCGGGA
GTCGAGATCG GCGCCGACGG GCCGTCGCAG ATGGCGCTCG AGGACATCGC CATGATGCGG
GCGGTCGGCG GCTCGACGGT GCTCTACCCG AGCGATGCGA CGTCCGCCGC GAAGCTCGTC
GAGGCGATGG CGGATCTGCC CGGGGTCAGC TACCTGCGCA CCACCCGTGG AGCCTACCCC
GTGCTCTATG GCCCGGACGA GCCGTTTGCC CCCGGTGGTT CCAAGGTGCT CCGCCGATCG
AATGCCGACA CCGTCACGCT CATCGGTGCC GGTGTCACCC TGCACGAGTC GCTGGCCGCG
GCGGACACCC TCGTGGCCGA GGGGATCGCG GCCCGCGTGA TCGACCTGTA TTCCGTGAAG
CCGGTCGACG CGGCGACGCT CGCCGACGCC GCCCAGGCCA CCGGCGGGCG CATCGTCGTC
ACCGAGGATC ACTACCCGGA GGGTGGACTG GCCAGCGCGG TGCTGGAAGC GCTCAGCGAC
GGCGGCGTGC CGCTGTCGGT CCGTCATCTC GCGGTGCGGT CGCTGCCGGG TTCCGGGACG
TCTCAGGAGC TCCTGGACGC GGCCGGCATC TCCGCGAGGC ACATCGTCGA GGCCGCCCGC
GACCTGCTGC GCTGA
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| Protein sequence | MATPVSESTV GTADLETVRE LAQQLRVDSV RSSTSAGSGH PTSSMSAADV LAVLVARHLR
YDWDNPADPA NDHLIFSKGH ASPLIYSIFK AVGVVGDDEL INGYRRFGER LQGHPTPVLP
WVDVATGSLG QGLPDGVGVA LAGKYLDKVP YRVWVICGDS EMAEGSVWEA LDKASYYNLS
NLIAIVDVNR LGQRGPTELG WDLDTYARRV ESFGARAVVV DGHDIAAIDA VLADAEDVTR
PTVILARTRK GEGFSETADV EGWHGKPFPA DMADRAIAEL GGLRDLRVRG PVPPADLPRP
APVERPVITL PTYDLGAKVA TRRAYGQALA ALGARTDVVA LDAEVSNSTY SEDFAKIYPD
RFFEIFIAEQ QLVAAAVGLS VRGYVPFAST FAAFFSRAYD FIRMAAISQA DIRLSGSHAG
VEIGADGPSQ MALEDIAMMR AVGGSTVLYP SDATSAAKLV EAMADLPGVS YLRTTRGAYP
VLYGPDEPFA PGGSKVLRRS NADTVTLIGA GVTLHESLAA ADTLVAEGIA ARVIDLYSVK
PVDAATLADA AQATGGRIVV TEDHYPEGGL ASAVLEALSD GGVPLSVRHL AVRSLPGSGT
SQELLDAAGI SARHIVEAAR DLLR
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