| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1276 |
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| Symbol | |
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| ID | 3905081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1523879 |
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| End bp | 1526572 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878610 |
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| Product | pyruvate phosphate dikinase |
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| Protein accession | YP_480383 |
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| Protein GI | 86739983 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.214047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCT ACGTGTATGG CTTCCACCAG GGCAACAAGG ACATGAAGGA TCTTCTCGGT
GGTAAGGGTG CGAACCTCGC CGAGATGACG AATCTCGGCC TGCCTGTCCC GCCCGGGTTC
ACTATCAGCA CCCAGGCATG CCGGGAGTAC CTTGCCGGCG GCGAACCGGT CGGGCTACGG
GCGGAGATCG ATCATCATCT TGCCACCCTG GAGACCGCCC GGGGACGGCG GCTCGGCCAG
GCCGACGATC CGCTGCTGGT GTCGGTGCGT TCCGGCGCGA AGTTCTCCAT GCCCGGGATG
ATGGACACCA TTCTGAACAT CGGCCTGACC GATCAGGCCG TCTTGGGCCT GGCCGAGCAG
TCAGGTTCGC CGCGGTTCGC CTGGGACTCC TACCGCCGGC TGCTGGCCAT GTTCGGCCGG
ACCGTCCTCG GCGTCGGCGA GCCGTCGTTC GACGCGGCCC TCGAGGCGGC GAAGCGGGCC
AAGGGCACCA GTAGCGACCT CGACCTCGAC GAGAACGACC TGCGGGCGCT CGTCGCGACC
TACCAGCGGA TCGTGCTCGA GCGCACCGGC CGCCCCTTCC CCCAGGATCC CCGCGAGCAG
CTGGATCTCG CGATCCGAGC GGTGTTCGAC TCCTGGAACG GGCCGCGGGC CCGGCTGTAC
CGCCGTACCG AGCGCATTCC GGACGATCTC GGGACGGCAG TGAGCGTCGT CGCGATGGTG
TTCGGCAACC TTGGAACGGA TTCGGGCACC GGGGTGGCCT TCACCCGGGA TCCGGGCAGC
GGCGAACCCG GCGTGTACGG AGACTATTTG CCCAATGCCC AGGGCGAGGA TGTGGTGGCC
GGGATCCGTA ACCCGGTTCC CCTCGCCGAG CTGGAGCGGA TCGACCCGGC ATCCTTCACC
GAACTGCGCG AGATCATGAC GCGCCTGGAG AAGCACTACC GGGACCTGTG CGACATCGAG
TTCACGATCG AACATGGCAG GTTGTGGATC CTGCAGACCC GCGTCGGCAA ACGCACTGCC
GCGGCGGCTT TCCGGATCGC CGCCATGCTC GCCGAAGGCG GTGTCATCGA CGACGACGAG
GCGCTGTGCC GGGTGAGCGG CGACCAGCTC GCCACCCTGA TGTTCCCGCG CTTCGACGAC
ACGGCCCGGC CCGCCCCGAT CGCGACGGGA GTGAACGCCG CGCCCGGGGC GGCGGTGGGG
GAGGCCGTCT TCGACGCCGC CGAGGCGGTG CGGGTGGCGG CCGAGGGCCG ACCGGTCATC
CTCGTCCGCC GCGAGACGAA TCCCGATGAC CTCGCGGGCA TGCTCGCGGC GCGCGGAATC
CTGACCTCCC GAGGCGGCCG GACGTCGCAT GCCGCCGTCG TCGCCAGAGG ATTGGGCCGG
ACCTGCGTGT GCGGGGCCGA GGAGATCGAG GTCGATCCCG CCGGTCGCCG CCTCACCACC
GGGCGGGGCG TGGTCGTGCG GGAGGGGGAC ATCCTCTCCA TCGACGGGAC CATCGGCGCG
GTATACCCCG GTTCCGTACC ACTCGTCCCG TCACCAGTCG TCGAGTACTT CGAGGCCGGC
CGTCCCGACC ATCCCCGGCC GGGCGGGGAC CTGGTCGCCG CCGTGGATCG GCTGATGCGG
CACGCCGACC GGTCCCGCCG GCTGCGGGTC CGCGCGAATG CCGACACCGG GCCGGACGCC
GCGCGGGCCC GCCGGTTCGG CGCCGCGGGC ATCGGGCTGT GCCGCACCGA GCACATGTTC
CTCGGGGATC GTCGTACCCT GGTCGAGCAG ATGATCCTCG CGGGAACGCC GGCTGAGCGG
ACCGAGGCGC TCAGCCGGCT GCTTCCCCCG CAACGGGAGG ATTTCGTCGA GATCTTCACC
GCGATGGACG GTCTGCCCGT CACGGTCCGG CTGCTCGATC CGCCGTTGCA CGAGTTCCTC
CCGGACCTCA CCGAGCTGTC CGTGTCGATC GCCGCCGCGG ACGCCGCCGG AAGGCCGGTC
GACGACGCCG ACCGGGAGAG GCTGGCGGTC CTGCGCAGCA TGCACGAGAC CAACCCGATG
CTGGGTCGCC GCGGCGTCCG ACTCGCTCTC ACCGTCCCGG GGCTGGTGGA ACTGCAGGCG
CGGGCGATCG CCGAGGCGCT GGTGCGCTGC CGCCGCGTAG GCGGTGATCC CCGTCCCGAG
ATCATGGTTC CGTTCATCTC CACCGCGACG GAGCTGGATG CCATCCGGGA CCGGGTGCGC
GGGGTGCTGG CCGAGGTCGG CACCGAGAGC GGCCTGGAGA TCGACCTGCC GATCGGCACG
ATGATCGAGG TTCCGCGGGC GGCGCTCACC GCGGACCAGA TCGCCCGCCG CGCCGAGTTC
TTCTCGTTCG GCACCAACGA CCTCACCCAG CTGCTCTGGG GTTTCTCCCG GGATGACGTC
GAGGCATCGT TGCTGCCGCG CTACCTCGAC CTCGGCATCC TCGCCGGGTC GCCGTTCGCG
TCGGTGGACC GCGACGGGGT GGGCGCCCTG ATGAGGACGG CGGTCCGGGC TGGGCGGGGC
GCTCGGCCCG ATCTCGGCCT CGGCGTCTGT GGCGAGCACG GCGGCGATCC CGATTCCGTG
CACTTCTTCG CCGAACTCGG GCTCGACTAC GTCTCCTGTT CGCCGTTCCG GGTGCCGGTG
GCCCGGCTGG AGGCCGGGCG TGCCGCGGTT CTCGGCCGGT CGACGGTCGG GTGA
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| Protein sequence | MARYVYGFHQ GNKDMKDLLG GKGANLAEMT NLGLPVPPGF TISTQACREY LAGGEPVGLR
AEIDHHLATL ETARGRRLGQ ADDPLLVSVR SGAKFSMPGM MDTILNIGLT DQAVLGLAEQ
SGSPRFAWDS YRRLLAMFGR TVLGVGEPSF DAALEAAKRA KGTSSDLDLD ENDLRALVAT
YQRIVLERTG RPFPQDPREQ LDLAIRAVFD SWNGPRARLY RRTERIPDDL GTAVSVVAMV
FGNLGTDSGT GVAFTRDPGS GEPGVYGDYL PNAQGEDVVA GIRNPVPLAE LERIDPASFT
ELREIMTRLE KHYRDLCDIE FTIEHGRLWI LQTRVGKRTA AAAFRIAAML AEGGVIDDDE
ALCRVSGDQL ATLMFPRFDD TARPAPIATG VNAAPGAAVG EAVFDAAEAV RVAAEGRPVI
LVRRETNPDD LAGMLAARGI LTSRGGRTSH AAVVARGLGR TCVCGAEEIE VDPAGRRLTT
GRGVVVREGD ILSIDGTIGA VYPGSVPLVP SPVVEYFEAG RPDHPRPGGD LVAAVDRLMR
HADRSRRLRV RANADTGPDA ARARRFGAAG IGLCRTEHMF LGDRRTLVEQ MILAGTPAER
TEALSRLLPP QREDFVEIFT AMDGLPVTVR LLDPPLHEFL PDLTELSVSI AAADAAGRPV
DDADRERLAV LRSMHETNPM LGRRGVRLAL TVPGLVELQA RAIAEALVRC RRVGGDPRPE
IMVPFISTAT ELDAIRDRVR GVLAEVGTES GLEIDLPIGT MIEVPRAALT ADQIARRAEF
FSFGTNDLTQ LLWGFSRDDV EASLLPRYLD LGILAGSPFA SVDRDGVGAL MRTAVRAGRG
ARPDLGLGVC GEHGGDPDSV HFFAELGLDY VSCSPFRVPV ARLEAGRAAV LGRSTVG
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