| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1266 |
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| Symbol | |
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| ID | 3906112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1512636 |
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| End bp | 1513328 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637878600 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_480373 |
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| Protein GI | 86739973 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0887109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCGCC GGCTGCGGCC GGGGGAGCCG GTCGACGTGA CCGACGGTCT CGGCCGTGCG
GTGGAGTGCG AGGTCGTTGC CGCCCGGCGG GATGAGATCG ACTGCGCGGT CCGGCGCCGG
GTCGCCGCCG CGGCCCCGAG CCCCCGACTG GTTGTCGTGC AGGCCCTTGC CAAGGGGGAT
CGGGGCGAGC GGGCGGTGGA GATGCTGACC GAGGTCGGTG TCGACGAGAT CGTCCCGTGG
TCGGCGGCCC GGTCCGTGGC CCGCTGGGAG GGTGTCCGTG GCGTGCGGGC CCGGGAACGC
TGGGTCAGAG CCGCGGAGGA GGCGTCGAAG CAGTCCCACC GACTGCACTG GCCGGTGGTG
GGCGAGTTGG CCGGCCTGAA GGAGGTTGTC GAGCGGGTGC GGGCGGCGGC GCTTGCCGTC
CTCCTGCACG AGGAGGCGAC CATCCCGTTG GTTGGCCTGG CCCGCTCGGT TGAGGTGTCG
GAGCGAGTGG CTCCGGCCGC CTCGGCGGCG GAGCTGGTGC TCGTCGTGGG CCCCGAGGGA
GGGGTGTCCG AGTTGGAACT GGCCACGCTG GGCGAGGCCG GAGCGATCGT GTCGCGGCTC
GGTTCGACGG TGCTGCGCAC ATCCACCGCC GGCGTCGTGG CCGCGGCGGT CGTGTTCGCG
GACCTCGGTC GTTGGGACGG CCCGGCGCGA TGA
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| Protein sequence | MVRRLRPGEP VDVTDGLGRA VECEVVAARR DEIDCAVRRR VAAAAPSPRL VVVQALAKGD
RGERAVEMLT EVGVDEIVPW SAARSVARWE GVRGVRARER WVRAAEEASK QSHRLHWPVV
GELAGLKEVV ERVRAAALAV LLHEEATIPL VGLARSVEVS ERVAPAASAA ELVLVVGPEG
GVSELELATL GEAGAIVSRL GSTVLRTSTA GVVAAAVVFA DLGRWDGPAR
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