| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1265 |
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| Symbol | |
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| ID | 3906111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1511373 |
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| End bp | 1512512 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878599 |
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| Product | chaperone DnaJ |
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| Protein accession | YP_480372 |
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| Protein GI | 86739972 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0905779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTGG ATTATTACGC CGTTCTGGGC GTACGCCGGG AAGCGTCGAA CGACGAGATC
AAGCGGGCCT ACCGCAAACT GGCCCGTGAG CTGCATCCGG ATGTCAATCC AGATCCGGAT
GCACAGCAGC GCTTCCGGGG CGTCACGGCC GCGTACGAGG TGCTCTCCGA CCCGGAGAAG
CGCCAGATCG TCGACCTGGG CGGCGATCCG CTCGCGCCCG GTGGCAGCGG CGGTGGCGGT
TCGCCGTTCG GCGCCGGTTT CGGCGGCCTC GGTGACATCA TGGACGCCTT CTTCGGCGGC
GGGTCGAGCC GTGGGCCCCG GTCCCGGGTC CGGCGCGGCA ACGACGCGCT GCTGCGCATC
GAGCTCGACC TGTCCGAGAC CGCGTTCGGC GCCACGCGCG AGATCACCGT GGACACGGCG
GCGGTGTGCT CGACGTGTAC CGGTGCCGGT GCGGCTCCCG GCACGCACCC GTCGACCTGC
GGCACCTGCG GCGGGCGGGG CGAGGTCCAG CAGGTCACCC GTTCCTTCCT CGGCCAGATG
GTGACCTCCC GGCCCTGTCC GCGGTGTTCG GGTACCGGCA CCGTGATCGA GCATCCCTGC
CGGGACTGCG GCGGCGACGG CAGGGTGCGC AAGCGCCGGA CGCTCACTGT GAAGATCCCC
TCCGGGGTCG AGGACGGCAT GCGCATCCGG CTGTCGGGCG AGGGCGAGGT CGGGCCCGGC
GGTGGGCCGC CCGGTGACCT TTACGTCGAG GTCTCCGAGA AGCAGCACCC GGTTTTCACC
CGGGAGGGCG ACGATCTGCA CTGTGAGCTG CCGCTGCCGA TGACCTCGGC GGCGCTCGGC
ACCTCCGCCA CGCTGGAGAC CCTCGACGGC ACCGAGACCA TCGCCGTGAA GCCCGGCACC
CAGCCCGGTG AGGTCATCAA GCTCGCCGGC CGCGGGGTTC CGCATCTGCG GGCCGCCGGG
CGCGGTCATC TGCACATCCA CATCAACGTC GAGACTCCGA CGAAGCTGGA CGGCGAGCAG
GAGCGGCTGC TACGAGAGCT GGCGAAGCTG CGCGACGAGG AGGCACCGGC CGTCGTGGGC
GGATCCGCCG GCGGCGCGGC GGGGCTATTC CGGCGGCGGG GCACGCGCCG CGGCCGTTAG
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| Protein sequence | MAVDYYAVLG VRREASNDEI KRAYRKLARE LHPDVNPDPD AQQRFRGVTA AYEVLSDPEK
RQIVDLGGDP LAPGGSGGGG SPFGAGFGGL GDIMDAFFGG GSSRGPRSRV RRGNDALLRI
ELDLSETAFG ATREITVDTA AVCSTCTGAG AAPGTHPSTC GTCGGRGEVQ QVTRSFLGQM
VTSRPCPRCS GTGTVIEHPC RDCGGDGRVR KRRTLTVKIP SGVEDGMRIR LSGEGEVGPG
GGPPGDLYVE VSEKQHPVFT REGDDLHCEL PLPMTSAALG TSATLETLDG TETIAVKPGT
QPGEVIKLAG RGVPHLRAAG RGHLHIHINV ETPTKLDGEQ ERLLRELAKL RDEEAPAVVG
GSAGGAAGLF RRRGTRRGR
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