| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1263 |
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| Symbol | |
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| ID | 3906109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1508864 |
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| End bp | 1510099 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878597 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_480370 |
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| Protein GI | 86739970 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0206083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAAA AGCCTCCCGA CGGCTCGCTT CCGCCGGACG ACGGTGCCCT CCCGGCGGCC
GCGCTGGCCG AGGTGACCCG GCGGCCGTTC GGGGTCTACG TGCATGTGCC CTATTGCGCG
GCGCGCTGCG GCTACTGCGA CTTCAACACC TACACGGCGG CCGACCTAGG CGGCGCCCTG
GTGTCGTCGG TGGGCCTCAC GACGTTCGTC GACATCGCGA CCGGCGAGGT CCGGCTCGCG
CGTACCGTGC TTGGTGAGCA GGAGCTGGTG GTCTCCACGG TCTTCGTCGG TGGCGGCACG
CCGACCCTGT TGACCGCGGA CGATCTCGGG CGGCTGTTGC GGATCCTGGA CGACGGGTTC
GGGCTGGCGT CCGACGCGGA GATCACCACC GAGGCGAATC CGGAGTCGGT GGATCCGGCG
CAACTGGAGC AGCTGCGCGC CGCCGGTTAC ACCCGGATCT CCTTCGGGAT GCAGAGTAGC
CGTCCGCACG TCCTCGCCGC CCTGGACCGG CGGCACACCC CTGGCCGCGT GCCCGAGGTG
ATGCGCTGGG CCCGCAAGGC GGGCTTTGAC CAGGTCAGCC TGGACCTCAT CTACGGGGCT
CCGGGCGAGT CGGAGGCGGA CTGGGCGGCG AGCCTGGACG CGGCGATCCA GCTCGGCCCG
GACCACGTCA GTGCCTACGC GCTGACGGTT GAGGAGGGCA CGAAACTGTC CCGCCGGGTC
CGCCGGGGCG AGCTGCTCGA ACCCGACGAC GACCTGCTTG CCGACCGCTA CCTGCAGGCC
GATGACGCTC TGTGCGCGGC CGGCCTGACC AGCTACGAGG TCAGCAACTG GTCGCGGGGG
ACCGATACCC GGTGTCGGCA CAATCTGGGG TACTGGCGCG GAGATCACTG GTGGGGGATC
GGTCCGGGCG CGCACAGCCA CGTCGGCGGG GTGCGATGGT GGAACGTGCG TCATCCGGCG
GAGTACGCGG CCCGGCTGGG GGCCGGGCGC AGTCCCGCGG CCGCCCGGGA GGAGCTCGAC
GCGCAGGCCC GCCGGGTCGA GCGGGTCATG CTGGGCGTCC GGTTGGCCGA GGGACTGGCC
GTCGGTGAGC TGGACGGGCC CGGCCGGGAG GCCACCGCCG GGCTCGCGAA GTCCGGCCTG
GTGGAACCCG GTGCCCTGGA GTTCGGCCGG GTGCGTCTCA CTCGTCGCGG TCGTCTGCTC
ACCGACACGG TCGTGCGAGC CCTGCTGCCC GACTGA
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| Protein sequence | MPQKPPDGSL PPDDGALPAA ALAEVTRRPF GVYVHVPYCA ARCGYCDFNT YTAADLGGAL
VSSVGLTTFV DIATGEVRLA RTVLGEQELV VSTVFVGGGT PTLLTADDLG RLLRILDDGF
GLASDAEITT EANPESVDPA QLEQLRAAGY TRISFGMQSS RPHVLAALDR RHTPGRVPEV
MRWARKAGFD QVSLDLIYGA PGESEADWAA SLDAAIQLGP DHVSAYALTV EEGTKLSRRV
RRGELLEPDD DLLADRYLQA DDALCAAGLT SYEVSNWSRG TDTRCRHNLG YWRGDHWWGI
GPGAHSHVGG VRWWNVRHPA EYAARLGAGR SPAAAREELD AQARRVERVM LGVRLAEGLA
VGELDGPGRE ATAGLAKSGL VEPGALEFGR VRLTRRGRLL TDTVVRALLP D
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