| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1258 |
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| Symbol | |
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| ID | 3906104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1501855 |
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| End bp | 1504473 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637878592 |
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| Product | ComEC/Rec2-related protein |
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| Protein accession | YP_480365 |
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| Protein GI | 86739965 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0658] Predicted membrane metal-binding protein
[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0672087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACCG GACTCGCGCT GCCGGAACGG CCGTCCGGGG CTTCCCGTCC CATGGACGCC
CGGCTGGTGG GCCCGGCGGT CATGGCCTGG GCTGGCGCGG CGGGTGCCGG CACCTGGCCG
CCGTCCGTTC CGTTGCTGGG CGCCGCCGGT GCGGTGCTCG TCGCGGCTCC GATGTTCCTG
CTGCTCCAGG TCCGTCCGCG GGGTGGTCGG CCGACTCGCC CGGGACCGGG CGGCGCTCGG
GCCGAGGCGG CTACGGGCGC GTCTCGTCCG TCGCAGTCGC AGTCGCAGCC GCGCAGCGCG
CCGCTCACCC GGGGCGTTGG GCGGTGCTCC GGCGGCACTG TCGTCGTGCT CACGGCCCTC
GTCTTCCTGG CCGCCGGGTT TCTCGCGGGT GGACTGGCGG CTCGTCCGCG TGACAGCGGC
CCGCTCGCCG ATCTGGTCCG GCATGGCCGT CCGGTCACCG CCGAGGTCGT CGTCACCGAC
GATCCCCGCG CCACCTCCTC GTCCACCGCG GTCCGGACGG GAACCGGGCC CGGAGCCGGA
GAGGGAAGAG GAGAGGGCGG CGGCGCCGAT CGCGTGACCT TCGTGATCTC CGTCCGGGCG
GAACGCCTTA CCGCGTCACC GGCGGATCTG CGGGTCCGGG CCCCGATGGT CCTGCTCGCG
CGGGGTGGCG GCTGGGGTGC TCTGCTGCCC AGCCAGCACC TGGTCGTCTC CGGCAGGCTC
GCCGAACCCC GGGTCGGTGA CACCGTGGCC GCCGTCCTGT TCGCCGACGG CCCACCGCGG
ACCCGCGGCG GACCCGCAAT GATCCAACGA ATCGCCGGGG GGCTGCGGGC CGGGCTGCGT
CGAGCCGCTG GGGGACTGCC TGAACCGCGT CGCGGGCTGC TGCCCGGCCT CGTGGTCGGC
GACGTCTCCG GGCTCGACGA TGCGGTGCGC GCGGACTTCC GCGCCGCCGG AATGTCCCAT
CTAACGGCCG TGTCCGGTAG CAACGTCGCC ATCGTGACGG CCTCGGCGCT CTACCTCATG
GGATGGACCG GGCGTGGGTC ACGGTCGCGC GCCGCGGTGG GAGCCCTCGC TCTCGTCGGG
TTCGTCGTGC TCGCCCGGCC CTCGGCCAGC GTGCTGCGTG CCGGGGCGAT GGGTCTGGTC
GGCCTGCTCG GGCTCGCCGT TGGCCGTCCC AGGGCGGTGC TGCCCTCCCT GGCGGCGAGC
GTGATCATCC TGATCCTGGC GGATCCCGCG CTCGCCCTCT CGGTCGGCTT CGCGCTGTCC
GTCCTCGCCA CGGCCGGAAT GATCGTTCTC GCGCCGGGCT GGCGGGACGC GCTCGCTCGC
CGGCTGCCGG CGCGAATCGC CGAGGTGCTC TCCGTCGCGG CCGCCGCCCA GCTGGCGTGC
ACCCCGGTGT TGGCCTGGAC CGGCGGGGGG CTGAGCCTCG TGGCGGTGCC CGCGAACGTC
CTGGCCGTGC CCGCCGTCGC ACCGGCGACC GTGCTGGGAG TACTGACGCT GGTCGTGGCG
GCGGTGTCGC CGTCAGCAGC CGGGCTGCTC GCGCACCTCG CCGATCTGCC GTGCTGGTGG
CTGGTGACGG TCGCCGGCCG GTGCGCCGAT CTTCCTGCCG CGACGCTGCC GTGGCCCACG
GGGGTGATGG GAGCGGGCGT GGCCGCCGGT GTCGCCTGGC TCGTGGTGGC GACGCTGCGG
CGGCGGGTGC CGCGGCGACT GGTCGCTGCG GCCCTGGTCG GCCTGCTCCT GGCGCGATGC
GCCGTCGCCG GGCGGCTGGC GCCGTGGCCG CCGCCCGGCT GGCGCCTGGT CGCCTGCGAC
GTCGGTCAGG GCGACGCCCT CGTGCTGTCG GCGGGACCGG GCACCGCGGT GCTGGTCGAC
GCCGGCCCCG ATCCGGCCCT GCTGACCCGC TGCCTCTCCG ACCTCGGCGT GCGACGGATA
CCGGTGGTCA TTCTCAGCCA CTTCCACGCC GATCACGTCG AGGGGCTGCC GGCCGTGCTC
GGCCGGCTTC CGGTGGGGGA GGTACTCGGC AGTCCGCTGG GGGAACCCGT TCTCCAGTGG
CACCGGGTCC AACAGTGGAC CCGGCGGGCC GGTGTGCCGC TGCGGACGGC CGTCATCGGC
TCCCGGGCAC AGGTGGGGGC GGTCTCTTGG ACGGTCCTGG CTCCGCGCAC CGTGTTGCAC
GGCACCGAGA GCGATCCCAA CAACGCGAGC CTGGTGCTCT CCGCACGGGT GGGGGAGGTG
ACCATCCTGC TCACCGGGGA TGTGGAGCCG CCGGCCCAGC GGGTGTTGAC CGGCAGCCCG
GAGGATCGGA CGGCGCTACG AGCCGACGTG CTCAAGGTGC CCCATCACGG CGCCGCTGAT
CAGGACGCCA CCTTCCTCGC GGCGACCGGG GCCCGATTCG CCCTGATCAG CGTCGGCACC
GGGAACAGCT ATGGTCATCC CGCGCCGTCC ACCTTGCGGA CGCTGCGCCG GTCCGGCATG
GCCGTCGCCC GGACCGACCG CGACGGCGCG GTGGCGGTGG TCGCCACGGC GGCACCCGCC
GGGTCCGCCG AGTCCGGGTC GCTGGCGGGA GCCGCCTCCG GGTCGGGGGC GGGAGTCCGC
GTCTCGGTGG TGCTCCGCCG GCCCGGGGGC GGATCGTGA
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| Protein sequence | METGLALPER PSGASRPMDA RLVGPAVMAW AGAAGAGTWP PSVPLLGAAG AVLVAAPMFL
LLQVRPRGGR PTRPGPGGAR AEAATGASRP SQSQSQPRSA PLTRGVGRCS GGTVVVLTAL
VFLAAGFLAG GLAARPRDSG PLADLVRHGR PVTAEVVVTD DPRATSSSTA VRTGTGPGAG
EGRGEGGGAD RVTFVISVRA ERLTASPADL RVRAPMVLLA RGGGWGALLP SQHLVVSGRL
AEPRVGDTVA AVLFADGPPR TRGGPAMIQR IAGGLRAGLR RAAGGLPEPR RGLLPGLVVG
DVSGLDDAVR ADFRAAGMSH LTAVSGSNVA IVTASALYLM GWTGRGSRSR AAVGALALVG
FVVLARPSAS VLRAGAMGLV GLLGLAVGRP RAVLPSLAAS VIILILADPA LALSVGFALS
VLATAGMIVL APGWRDALAR RLPARIAEVL SVAAAAQLAC TPVLAWTGGG LSLVAVPANV
LAVPAVAPAT VLGVLTLVVA AVSPSAAGLL AHLADLPCWW LVTVAGRCAD LPAATLPWPT
GVMGAGVAAG VAWLVVATLR RRVPRRLVAA ALVGLLLARC AVAGRLAPWP PPGWRLVACD
VGQGDALVLS AGPGTAVLVD AGPDPALLTR CLSDLGVRRI PVVILSHFHA DHVEGLPAVL
GRLPVGEVLG SPLGEPVLQW HRVQQWTRRA GVPLRTAVIG SRAQVGAVSW TVLAPRTVLH
GTESDPNNAS LVLSARVGEV TILLTGDVEP PAQRVLTGSP EDRTALRADV LKVPHHGAAD
QDATFLAATG ARFALISVGT GNSYGHPAPS TLRTLRRSGM AVARTDRDGA VAVVATAAPA
GSAESGSLAG AASGSGAGVR VSVVLRRPGG GS
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