Gene Francci3_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1254 
Symbol 
ID3903553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1498412 
End bp1499428 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content73% 
IMG OID637878588 
Producthypothetical protein 
Protein accessionYP_480361 
Protein GI86739961 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0999798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGTC GGTACACCCA GAAGCTGAAG ACCGACGACC TCGCCGCGGC GATGTCCGCT 
CGCGACGAGA CTGCCGGCGG GGTGGCGGAG AACTACAACG TGGCGCCCAC CTCGGCGATG
CCGATCGTCA TCGCCGAGCC GCGTGAGCTC CCGGACGGCG CTCTTCGGGG TGAGGCGCAC
CTCCCTCCGG CCGGCCGGCA CCCGGCCGGG AAGCCGCCGG CTGCCGCCCG GACCGAGCGG
GTCCTTCGCC TCGCGACCTG GGGGTTGGTG CCGTCCTGGG CCAAGGAGCG GACGATCGGG
GCAAAGATGA TCAATGCGCG GTCGGAGACG GCGGCGACCA AGCCGGCGTT CCGATCGGCC
TTCGCCGCAC GGCGCTGCCT CGTCCCGGCG ACCGGTTTCT ACGAGTGGTT TCATCCGGGT
GGTGGCTCGC GGCGGGGGCA ACCCTTCTAC ATCCGTCCCG CGGGCCATCC CGCGACCGGC
GGGATCTTCG CGTTCGCGGG TCTCTACGAG GTCTGGCGCC GGGGTGAGGC CCCGCTGGTG
ACCTTCACGA TCCTCACGAC CGGGGCCGCC GCGGGGCTGG AGTTCCTGCA CGACCGCTCG
CCGGTGATCC TGCCCGAGGC CGCCTGGGAT CGCTGGATGG ATCCCTCGGT CCGCGATCCC
GCCGCGTTCG CCTCGCTGCT GCGGCCGGCT CCGGCCGGGG TGGTCGCGGC GCATCCGGTC
GCGGCCGAGG TGGGCAGTGT CCGGAACAAG GGTCGTCATC TCATCGATCC CGTCGAGATC
GATCCGGTGG TCGCCGCGGC CGTCGCGCAG GCGGGCGGGC GGACGGCTCT CGCGGTGGAC
CCGGAGCGGT CCGGTGGTTC CGTCGGCGGT GGTACCGGTC CGTCCACGCG GGCGGGCGGC
ACCGTCGATC TGTCGTCGTT CGGCATCGAC CCGGTCCATG ACCCCGTCCA TGACCCGGTC
GATACCCCCG TCAATGCCCC GGGCAAAGGC ACCGCCGCGG GGCCGGGAGG CGGGTGA
 
Protein sequence
MCGRYTQKLK TDDLAAAMSA RDETAGGVAE NYNVAPTSAM PIVIAEPREL PDGALRGEAH 
LPPAGRHPAG KPPAAARTER VLRLATWGLV PSWAKERTIG AKMINARSET AATKPAFRSA
FAARRCLVPA TGFYEWFHPG GGSRRGQPFY IRPAGHPATG GIFAFAGLYE VWRRGEAPLV
TFTILTTGAA AGLEFLHDRS PVILPEAAWD RWMDPSVRDP AAFASLLRPA PAGVVAAHPV
AAEVGSVRNK GRHLIDPVEI DPVVAAAVAQ AGGRTALAVD PERSGGSVGG GTGPSTRAGG
TVDLSSFGID PVHDPVHDPV DTPVNAPGKG TAAGPGGG