| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1251 |
|---|
| Symbol | |
|---|
| ID | 3903550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1495355 |
|---|
| End bp | 1496584 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637878585 |
|---|
| Product | alkane 1-monooxygenase |
|---|
| Protein accession | YP_480358 |
|---|
| Protein GI | 86739958 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.10941 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAC CTGTCCTCAC CGCGCCCGGC GGCCTCGCCT GGCGGGACGG CAAGCGGTAC
ATGTGGCTCA CCGCGATCAT CGTTCCGTTG CTGGCCATCG TGGGATACGG CCTGTGGCAT
CGGACGGGTG TCGAGCTGCA CTGGTGGATC ACCCCGCTCT TCGTCTTCGT CCTGGTTCCG
CTGCTCGACA TGACCACACC GCCGGATCCG GTCAATCCAC CGGAGGAGAT CCGGGCCGCG
CTGGAGGCCG ACCGTTACTA CCGCCGGTGC ACGTATCTCT ACCCGCCGCT GGCGGGCGTC
GGCCTGCTGC TGGGCGCCTC GGCCTGGACG AACGGCGACC TGTCGTGGTC CGCCCGGATC
GGCGTGGTGG TGTCGGTCGG CACCGTGACC GGGGTGGGCA TCACCACCGC GCACGAGCTC
GGCCACAAGC GGGGGATTTT CGAGCGCTGG TTGGCGAGGT TGATGCTGGC GCCGGCCGCG
TACGGTCACT TCTCCGTAGA GCACAACCGG GGCCATCACG TGCGGGTAGC GACGGCGGCG
GACCCGGCGA GCGCCCGGTT GGGGGAGAGC TTCTGGCGGT TCTGGCCGCG GACCGTCGTC
GGCAGCCTGC GTTCCGCCTG GTCGCTGGAG GCCGCCCGGC TACGGTTGCG CGGCCGACGG
GTCTGGTCGG TGCGCAACGA GGTCGTGCTT GGCTGGTTGC TCACCGCGGT GTTGTTCCTG
GCGCTGGCCG TCGAGTTCGG GCCGGCTGTA CTCGTCTTCC TCGTCGCCCA GGCGGCCTTC
GGGTTCACCT TGTTGGAGGG GGTCAACTAC ATCGAGCACT ACGGCCTGGC CCGGGAGCTG
ACTCCGAGCG GGCGTTATGA GAAGGTCGAC CCCCGGCACA GCTGGAACAG CGACGCCGTG
ATCAGCAATC TGGCGCTTTA CCAGTTGCAG CGACACAGCG ACCACCACGC CAACCCGACC
CGGCGCTACC AGGCACTGCG GTCCTTCGAG GCCTCTCCCC AGCTACCGGC GGGGTACGCC
ACGCTCCTGC TCGCGGCGTA TCTCCCGCCG GTGTGGTTTC GGGTGATGGA CGACCGCGTC
GTCGAGCATT ACGGCGGGGA CGTCAGCCGG GCGAACCTGC ACCCCGCGCG CCGGGCCGCT
TTGCTGACCC GGTACCGGTC GCCGTCCGGG CCGCCGCCGT CCGGTACCGA GGTCGACGGG
TCTCCGTCCC GGGGCGGTGT TCGTGGGTGA
|
|---|
| Protein sequence | MAAPVLTAPG GLAWRDGKRY MWLTAIIVPL LAIVGYGLWH RTGVELHWWI TPLFVFVLVP
LLDMTTPPDP VNPPEEIRAA LEADRYYRRC TYLYPPLAGV GLLLGASAWT NGDLSWSARI
GVVVSVGTVT GVGITTAHEL GHKRGIFERW LARLMLAPAA YGHFSVEHNR GHHVRVATAA
DPASARLGES FWRFWPRTVV GSLRSAWSLE AARLRLRGRR VWSVRNEVVL GWLLTAVLFL
ALAVEFGPAV LVFLVAQAAF GFTLLEGVNY IEHYGLAREL TPSGRYEKVD PRHSWNSDAV
ISNLALYQLQ RHSDHHANPT RRYQALRSFE ASPQLPAGYA TLLLAAYLPP VWFRVMDDRV
VEHYGGDVSR ANLHPARRAA LLTRYRSPSG PPPSGTEVDG SPSRGGVRG
|
|---|
| |