Gene Francci3_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1249 
Symbol 
ID3903548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1493933 
End bp1494835 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content70% 
IMG OID637878583 
Productauxin efflux carrier 
Protein accessionYP_480356 
Protein GI86739956 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.105062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAC TGATCGTGCT CTTGGTCGGC CTGGTGGCGG GCATCGGGGT CCGGCACCGC 
GGACGACTGC CTGCGGACAC CGCCCACGTG ATCAACCTCT GGCTGCTGGA CGTGGCCCTG
CCCGCTCTGA CGCTGCGCGC CATGCACGGC ATCGTCTTCC CGCCGAACCT CGCGCTCGTC
ATCGCCGCGC CCTACCTGCT CTTCGTCCTG ACGACGGCCG GCTACGTGCT GGCCGGACGA
GCGTTGCGGA TGCCGCGGGA GGTCGTCGTC GCCCTGATCG CCACGACCGC GGTGGCGAAC
ACGAGCTTCG TCGGCATCCC GATGGTGACC GCCTTCTTCG GCGCGTCGTC GGTCCCGGTT
GCCGTGCTCG TGGATCAGCT CGGTTCCTTC CTACTGCTAA ACACGGTGGT CCTCGGGACG
GTCACGATCA GTGCCGGCGC ATCGCTTTCC CGCGCCGAGC TCGCCCGTCG AGTCCTCACC
GCTCCGGCGC TGATCGCCTT GGTGGCTGCG CTCGTCCTGC GGCCGGTGAC CTTCCCGGGC
TGGCTGAACG CCGCGCTGGG GTCGCTCGGT GGCACCCTCA CCCCGCTCGC CCTGTTCTCC
ATCGGTCTGC AACTCCAGGT GCGTGCGGTC CGGGTGTGGT GGCGGGAGCT GGCCCTCGGC
CTCGGCGTCA AGCTGGTCGC CGCGCCCGCG CTCGTGGTGG GGATCTACGC GCTGACGGGG
AGCGTCGGAG ATCACGACGT GCGGGTGGCC CTCTTCGAGG TGGCGATGCC CCCGATGGTC
GCCGGCGCAC TCATCGCCGC CCGTCACGAA CTCGCGACAC CGTTGCCGAG CCTGCTGGTG
GGAGTCGGGG TTCCGCTGTC GTTCGTGAGC CTGGTGGTCT GGGCGCTGCT CCTCGGGGCC
TGA
 
Protein sequence
MSALIVLLVG LVAGIGVRHR GRLPADTAHV INLWLLDVAL PALTLRAMHG IVFPPNLALV 
IAAPYLLFVL TTAGYVLAGR ALRMPREVVV ALIATTAVAN TSFVGIPMVT AFFGASSVPV
AVLVDQLGSF LLLNTVVLGT VTISAGASLS RAELARRVLT APALIALVAA LVLRPVTFPG
WLNAALGSLG GTLTPLALFS IGLQLQVRAV RVWWRELALG LGVKLVAAPA LVVGIYALTG
SVGDHDVRVA LFEVAMPPMV AGALIAARHE LATPLPSLLV GVGVPLSFVS LVVWALLLGA