Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1249 |
Symbol | |
ID | 3903548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1493933 |
End bp | 1494835 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637878583 |
Product | auxin efflux carrier |
Protein accession | YP_480356 |
Protein GI | 86739956 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.105062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAC TGATCGTGCT CTTGGTCGGC CTGGTGGCGG GCATCGGGGT CCGGCACCGC GGACGACTGC CTGCGGACAC CGCCCACGTG ATCAACCTCT GGCTGCTGGA CGTGGCCCTG CCCGCTCTGA CGCTGCGCGC CATGCACGGC ATCGTCTTCC CGCCGAACCT CGCGCTCGTC ATCGCCGCGC CCTACCTGCT CTTCGTCCTG ACGACGGCCG GCTACGTGCT GGCCGGACGA GCGTTGCGGA TGCCGCGGGA GGTCGTCGTC GCCCTGATCG CCACGACCGC GGTGGCGAAC ACGAGCTTCG TCGGCATCCC GATGGTGACC GCCTTCTTCG GCGCGTCGTC GGTCCCGGTT GCCGTGCTCG TGGATCAGCT CGGTTCCTTC CTACTGCTAA ACACGGTGGT CCTCGGGACG GTCACGATCA GTGCCGGCGC ATCGCTTTCC CGCGCCGAGC TCGCCCGTCG AGTCCTCACC GCTCCGGCGC TGATCGCCTT GGTGGCTGCG CTCGTCCTGC GGCCGGTGAC CTTCCCGGGC TGGCTGAACG CCGCGCTGGG GTCGCTCGGT GGCACCCTCA CCCCGCTCGC CCTGTTCTCC ATCGGTCTGC AACTCCAGGT GCGTGCGGTC CGGGTGTGGT GGCGGGAGCT GGCCCTCGGC CTCGGCGTCA AGCTGGTCGC CGCGCCCGCG CTCGTGGTGG GGATCTACGC GCTGACGGGG AGCGTCGGAG ATCACGACGT GCGGGTGGCC CTCTTCGAGG TGGCGATGCC CCCGATGGTC GCCGGCGCAC TCATCGCCGC CCGTCACGAA CTCGCGACAC CGTTGCCGAG CCTGCTGGTG GGAGTCGGGG TTCCGCTGTC GTTCGTGAGC CTGGTGGTCT GGGCGCTGCT CCTCGGGGCC TGA
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Protein sequence | MSALIVLLVG LVAGIGVRHR GRLPADTAHV INLWLLDVAL PALTLRAMHG IVFPPNLALV IAAPYLLFVL TTAGYVLAGR ALRMPREVVV ALIATTAVAN TSFVGIPMVT AFFGASSVPV AVLVDQLGSF LLLNTVVLGT VTISAGASLS RAELARRVLT APALIALVAA LVLRPVTFPG WLNAALGSLG GTLTPLALFS IGLQLQVRAV RVWWRELALG LGVKLVAAPA LVVGIYALTG SVGDHDVRVA LFEVAMPPMV AGALIAARHE LATPLPSLLV GVGVPLSFVS LVVWALLLGA
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