Gene Francci3_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1231 
Symbol 
ID3902976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1474756 
End bp1476456 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content72% 
IMG OID637878564 
Productphosphoglucomutase 
Protein accessionYP_480338 
Protein GI86739938 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0033] Phosphoglucomutase 
TIGRFAM ID[TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.347698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCA GTCCGCGTGC GGGGCAACCC GCCGCCCCCG AGGATCTCGT TGACGTTGAC 
GGCCTGCTCG CCGCCTACCA CGAGATCCAT CCCGATCCCG CCGATCCGAC CCAGCGGGTG
TCGTTCGGCA CGTCCGGTCA TCGTGGCTCG GCGCTGCGCG GCTCCTTCAA CGCCGACCAC
ATCCTGGCCA CCACCCAGGC GATCTGCGAC TACCGGAAGG AGGCAGGCGT CGACGGACCG
CTGTTCGTCG GGATCGACAC GCACGCACTG TCGGCGCCCG CGCTCGCGAG CGCCCTGGAG
GTCCTCGCCG CGAACGGCGT CACGGTATGC ATCGCCCCGG ACGGCGAGGC CACCCCGACC
CCGGTGATCT CGCACGCGAT CCTGCGCCAC AACCGCGAGC GCACGCCAAG CAACAGGACG
GGCAGGACGG ACACCACCGG CGCCACCGGC GCGACCGGCC CGGCGCGCGG CCTCGCCGAC
GGCATCGTCG TCACGCCGTC GCACAATCCG CCCGCCGACG GCGGGTTCAA GTACAACCCG
ACGCACGGCG GTCCGGCGGA CACCGGCGTC ACCAAGGTCA TCCAGGATCG CGCGAACGCC
CTGCTCGACG GTGGCCTCGC GGGCGTGGCC CGGGTGCCGT ACCCGCAGGC GCGCGCCGCC
GCCGTGGTCC ACGACTACGT CGGCGCCTAT GTCGCGGACC TCGGCGACGT CATCGATCTC
GACGCGATCC GCGGCGCCGG GGTGCGCATC GGCGTCGACC CGCTCGGTGG GGCGAGCCTC
GTGTACTGGC AGGCCGTCGC CGAGCGGTAC AAGCTGGACC TCGACGTGGT GAACACCACG
ATCGACCCGA CCTTCGCCTT CATGACGACC GACTGGGACG GCAGGATCCG GATGGATCCG
TCGTCGCCGT ACGCGATGGC CTCCCTGGTG CGGCTGGCCG GCTCGTTCGA CGTCGCCCTC
GCCAACGACG CCGACGCCGA CCGGCACGGC ATCGTCACCG GCACGGCCGG GCTGTTAAAC
CCGAACCACT ACCTCTCCGC GGCCATCGCC TACCTGTTCG GCCACCGCCC GGGCTGGCCG
ACCGGGACGG CGATCGGCAA GACGCTGGTC AGCTCCAGCA TGATCAACAG GGTCGGAGTG
GGCCTCGGCC GCGACGTGGT CGAGGTGCCG GTGGGCTTCA AGTGGTTCGT GGCCGGCCTG
ACCGACGGGA ACCTGGGCTT CGGCGGCGAG GAGAGCGCGG GCGCGTCGTT CCTGCGCCGC
GACGGCGCGG TGTGGACGAC CGACAAGGAC GGGATCATCG CCTGCCTGCT CGCCGCCGAG
ATGACGGCGG TCACCGGCCG GGACCCCGGG CAGTTGTACC GGGAGCTCAC CAATGTCCAC
GGTGCCCCGG CCTACCGGCG GGTCGACGCG CCGGCCACCC CAGCGCAGAA GAAGATCCTG
GCCGCGCTCA CCCCGGAGAG CCTCAGCGCG ACGACGCTCG CCGGTTCGCC GGTGACCGCC
GCGCTGTCGC ACGCGCCGGG CAACGGCGCG GCGATCGGCG GGGTGAAGGT CGTCACTGAC
GACGCCTGGT TCGCCGCCCG GCCCTCCGGC ACCGAGGACG TCTACAAGGT CTACGCGGAG
AGCTTCCGGG GCCCCGGACA TCTCGACGAG GTCATCACGG AGGCACAGTC GATCGTTGAC
GCCGCCCTCG CCCGCGGCTG A
 
Protein sequence
MPTSPRAGQP AAPEDLVDVD GLLAAYHEIH PDPADPTQRV SFGTSGHRGS ALRGSFNADH 
ILATTQAICD YRKEAGVDGP LFVGIDTHAL SAPALASALE VLAANGVTVC IAPDGEATPT
PVISHAILRH NRERTPSNRT GRTDTTGATG ATGPARGLAD GIVVTPSHNP PADGGFKYNP
THGGPADTGV TKVIQDRANA LLDGGLAGVA RVPYPQARAA AVVHDYVGAY VADLGDVIDL
DAIRGAGVRI GVDPLGGASL VYWQAVAERY KLDLDVVNTT IDPTFAFMTT DWDGRIRMDP
SSPYAMASLV RLAGSFDVAL ANDADADRHG IVTGTAGLLN PNHYLSAAIA YLFGHRPGWP
TGTAIGKTLV SSSMINRVGV GLGRDVVEVP VGFKWFVAGL TDGNLGFGGE ESAGASFLRR
DGAVWTTDKD GIIACLLAAE MTAVTGRDPG QLYRELTNVH GAPAYRRVDA PATPAQKKIL
AALTPESLSA TTLAGSPVTA ALSHAPGNGA AIGGVKVVTD DAWFAARPSG TEDVYKVYAE
SFRGPGHLDE VITEAQSIVD AALARG