| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1226 |
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| Symbol | |
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| ID | 3902971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1467635 |
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| End bp | 1468891 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878559 |
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| Product | exodeoxyribonuclease I subunit D |
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| Protein accession | YP_480333 |
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| Protein GI | 86739933 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0802336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATAACCG GAACAGCCAG AAAGGCGCGC AGTTCGGACC CCCATGACGA TCATCTCGAC
GGGATTGCCT ACCGTGCTCG CATGCGTGCG CTGCACACGT CCGACTGGCA TCTCGGGCGT
GGCCTGTACG GTCACGACCT GATGCCGGCC CAGGCGGCCT TCGTCGATCA TCTCGTCGAC
GTCGTCCGTT CCGAGGGCGT TGACGTCGTG CTCATCGCCG GCGACGTGCA CGATCGGGCG
ATCCCGCCGG TGGGCGCGCT GGAGCTCTTC GACGAGGCGC TCTCCCGACT GCGCGATGCC
GGCGCCCGGG TCGTGGTGAT CAGTGGCAAC CACGACGCGG CCCGCCGGCT CGGCGACAAG
GCCGGCCTGC TCGACCCCCG CGTCCGCATC CGGACGGATC CGGCCGCGGT CGGGGATCCG
GTCGTCGTCG AGGATCCCGC CGGGGCGGTC CGGGTGTACG CGATCCCCTA CCTGGAGCCG
TCGGCGGCGA ACTCCCAGCT TCCCGAACCG GCGCAGGCGC CATCTGGCTC GGACGTCCCG
GCCGCCGGGA TCCCCGCCGC GACGATGCAC CGGGCGATGC ACGCGGTGCG GGCCGACCTC
GCACGGTATC CGGATGCCCG GTCCGTCGTG GTGGCGCACG CCTGGGTCAC CGGCGGGGCG
GCGAGCGAGA GCGAACGCGA CATCAGCGTC GGCGGGGTGG GCAATGTGCC GGCCCGGTTG
TTCGAGGGGA TCACCTATAC CGCGCTCGGC CATCTGCACC GGCCACAGGC GATCGCCCCG
TCCGTCCGCT ACAGCGGATC GCCACTGGCC TACTCCTTCT CGGAGTCCGG CGACGCGAAA
GCGTCGCTGC TCGTCGAGAT CGGTCCGACC GGGCTGGGGA ACGTGACCCG CATCGGCGTT
CCCGCCCGGC GGCGGATGAC CCTGCTGCGC GGCAGTCTTG CCGACCTCCT CACCGACCCC
GCCCATGCCC CGCACGAGGC CGACTTCGTC TCCGCCGTGC TGACCGACCC CGTCCGCCCC
ATGGACGCCA TGGCCCGGTT GCAGCACCGG TTCCCCTTCG CCCTACGACT CGCGCACGAA
CCGGAGACGG AACCAGACGA GATACTCAGC TTCGGCCGGC GGACCCGGGG ACGCTCGGAG
CTGGAGATCG CCGAGGCCTT CGTCGCCCAT GTACGCAGCG CTCCCTCGGC TCGGGAACGT
GCTCTGCTCG CCGAAGCCCT CGGCGCCGCC CGCCGGGCCG AGGAGGAAGT CGCCTGA
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| Protein sequence | MITGTARKAR SSDPHDDHLD GIAYRARMRA LHTSDWHLGR GLYGHDLMPA QAAFVDHLVD
VVRSEGVDVV LIAGDVHDRA IPPVGALELF DEALSRLRDA GARVVVISGN HDAARRLGDK
AGLLDPRVRI RTDPAAVGDP VVVEDPAGAV RVYAIPYLEP SAANSQLPEP AQAPSGSDVP
AAGIPAATMH RAMHAVRADL ARYPDARSVV VAHAWVTGGA ASESERDISV GGVGNVPARL
FEGITYTALG HLHRPQAIAP SVRYSGSPLA YSFSESGDAK ASLLVEIGPT GLGNVTRIGV
PARRRMTLLR GSLADLLTDP AHAPHEADFV SAVLTDPVRP MDAMARLQHR FPFALRLAHE
PETEPDEILS FGRRTRGRSE LEIAEAFVAH VRSAPSARER ALLAEALGAA RRAEEEVA
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