Gene Francci3_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1217 
Symbol 
ID3903571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1454072 
End bp1454821 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content72% 
IMG OID637878550 
Producthypothetical protein 
Protein accessionYP_480324 
Protein GI86739924 
COG category[S] Function unknown 
COG ID[COG5011] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCGGC GACCTGAGGG GCCGCCGCCT CCGCCGGTGG TCGAACGGGT GCGACTTCGT 
TTCGCGAAGC GGGGCCGGCT GAGATTCCTC TCACATCGGG ACGTGGCGCG AACGTTCGAG
CGCGCATTGC GCCGCGCCGG GGTCCCGATG GCCTATTCGG CGGGATTCAG TCCGCATCCG
CGGATCTCGT GGCTGGGTGC CGCGCCGACC GGGGCAGCCA GTGAGGCCGA ATACGTCGAG
CTGGCCCTGG CAGCCTCGGT CGATCCGGAG GCGCTGCGGG TCGGCCTGGA CGCCGTTCTT
CCGCCGGGGC TGGACGTGCT CGCGTGCCAC CGGGCGGAAG GCGGCAGCCT CGCCGAGCGG
ATCGACGCCT CGCGGTGGTC GGTACGGTTG CCGGGTGCCT CCGGTCCGGA GGTCTCCGCC
GCCGTGCGGG AGCTGTTGCG CCGCGACGTG GTCGAAGTTG AGCGGGCGAC GAAGGACGGC
AGGCGACGGT TCGATGTGCG CGCGGCAGTG GTCTCCGCCG TTTGCCGCGC AGAGAACGAC
ACGTGTGCGA TACTGGAGAT GGTCGTGCGG CACACGACGC CCGCTGTACG ACCAGACGAC
GTGCTGACCG CCCTAGGCGT GGTAGCCGGC CTGCGCTCGT CGGCGCCGCC CGAGTCCACC
CGGCTCGAAC AGGGCCGACT GTGTGAGGAC GGCACTGTGG CGGACCCGCT GGCGCAGGAC
CGCAACGGCG CTGGCCGGCT GGTGGGTTGA
 
Protein sequence
MARRPEGPPP PPVVERVRLR FAKRGRLRFL SHRDVARTFE RALRRAGVPM AYSAGFSPHP 
RISWLGAAPT GAASEAEYVE LALAASVDPE ALRVGLDAVL PPGLDVLACH RAEGGSLAER
IDASRWSVRL PGASGPEVSA AVRELLRRDV VEVERATKDG RRRFDVRAAV VSAVCRAEND
TCAILEMVVR HTTPAVRPDD VLTALGVVAG LRSSAPPEST RLEQGRLCED GTVADPLAQD
RNGAGRLVG