| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1215 |
|---|
| Symbol | |
|---|
| ID | 3903569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1450705 |
|---|
| End bp | 1451940 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637878548 |
|---|
| Product | cell cycle protein |
|---|
| Protein accession | YP_480322 |
|---|
| Protein GI | 86739922 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0772] Bacterial cell division membrane protein |
|---|
| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.323316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.941733 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTAGACG AAGCGGGACC CACCGCACTT CGATCGTCTC CGGTGCCCAT CCGGGGGCGG
ATCGGGCACC TGCGGGAGAG GGCTTCCGGG CCCCACTCGC CGCTGCGCCG GCTCGACTGG
CCGCTGCAGC TCTGCGTCAT CGCGTTGTCC GTTCTCGGTG CTCTGCTGGT CTGGTCGGCG
ACCCGCCAGC GGCTCAGCGA GGCGGGCAGT GATCCCAACA CCTTCCTCGA TCGGCACCTG
CTGAACCTGG CCATCGGGCT GGTGCTCGGC GCGGTTGCGA CCGTCATCGA CTACCGGGCG
GTGCGGGCCT ACGCGCCCTT CGTCTATCTC GGCTCGCTCG TCGGGCTCGT CGCGGTACTC
CTGTTCGGTT CGACGATCAA CGGCGCACAC TCGTGGATTG TGCTGCCTGC CGGCTTCCAG
CTGCAGCCGT CCGAGTTCGC CAAGATGGCG CTCGTGGTCG GCGCGGCGAT GATCCTCGGT
GAGAAACACG AGGACCGGCA CACGGGAGTC CGGCGCGGCG CCCCTGGCCA CGGTGACGTG
CTGCTCGTGC TCGGGCTCGC CGTGGTCCCG ATCGGCTTGA TCATGTTGCA GCCGGACTTC
GGTACCGTCA TGGTTCTGGT CTTCACCACC CTCGGCATGC TGGCGGTCAG CGGCGCGCCG
CGCCGATGGG TGCTGGGGCT GATCCTCTGC GGTGTGCTGT TCGGCGGCGC GATCCTCCAG
TTCCATCTTC TGAAGCCGTA CCAGGAGGCC CGGCTGACCT CGTTCGTCTC CGAGAACAAG
GCATCGTCCG GCACGGGCTA CAACGTCGAC CAGGCGATGA TCGCGATCGC CAACGGCGGA
ATCTCCGGAC GGGGCCTGCT GCACGGCCAG CAGACCCAGG GCCAGTTCGT CCCGGAACAG
CAGACGGACT TCGTGTTCAG TGTCGCGGGG GAGGAGTTGG GATATCTCGG GGGTGGCGGA
ATCATCGTGT TGCTCGGCGT GGTTCTGTGG CGGGCCCTGT CGATCGGCTT CGGCTCGCAG
GACTCCTTCG GCGCGCTCGT CGCCACCGGG GTCGTCTCCT GGTTCACCTT CCAGGCGTTC
GTCAACATCG GCATGTGCCT GGGCATCATG CCGGTCACCG GCCTGCCGTT GCCTTTTCTC
TCCTACGGCG GTTCGTCGAT GTTCGCAAAC ATGATTGCTG TCGGACTCCT GCAGAACGTG
CGGCTGCGAT CCCGATCGGA CCCGTATGCC TCCTGA
|
|---|
| Protein sequence | MVDEAGPTAL RSSPVPIRGR IGHLRERASG PHSPLRRLDW PLQLCVIALS VLGALLVWSA
TRQRLSEAGS DPNTFLDRHL LNLAIGLVLG AVATVIDYRA VRAYAPFVYL GSLVGLVAVL
LFGSTINGAH SWIVLPAGFQ LQPSEFAKMA LVVGAAMILG EKHEDRHTGV RRGAPGHGDV
LLVLGLAVVP IGLIMLQPDF GTVMVLVFTT LGMLAVSGAP RRWVLGLILC GVLFGGAILQ
FHLLKPYQEA RLTSFVSENK ASSGTGYNVD QAMIAIANGG ISGRGLLHGQ QTQGQFVPEQ
QTDFVFSVAG EELGYLGGGG IIVLLGVVLW RALSIGFGSQ DSFGALVATG VVSWFTFQAF
VNIGMCLGIM PVTGLPLPFL SYGGSSMFAN MIAVGLLQNV RLRSRSDPYA S
|
|---|
| |