Gene Francci3_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1212 
Symbol 
ID3903566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1446871 
End bp1447854 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content69% 
IMG OID637878545 
Productrod shape-determining protein MreC 
Protein accessionYP_480319 
Protein GI86739919 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCGTG GCACGAGGCG ATCTCGCCTG GTGATCGTCG CCCTGCTCAT CATCGCCTTC 
ACTCTGATCA CCTTGGACTA CCGGACCGGG AGATCGGCCA CCGGAGCACG TGGGGTTCTG
CACTCGATCT TCGGGGGGGT CGAGAACGGC GTCACGACGG TCACCCGCCC GATTGGCCGG
ACCGCCTCCT CCCTGACGCA TCCGAACCGC TATCACGACC GGGCGGATCG ACTCGCGGAG
GAGAACGCCC GCCTGCGCCG CCAGATCGCC GACGACACCG AGATCGGCCG GATGTCGACC
GAACTCGCCG ACCTCCGGTT GTTGGCGGAC AAGGGCCAGT ACACCATCGT GCCGGCGAAG
GTGATTGCGG TCGGTGACGT GACGGGGACG GACTGGACCG TCACCATCAA CGCCGGCAGG
GCCGACGGCA TCGTGGTCGA CAAGACCGTG CTCAATGCCG ACGGGCTGGT CGGCACGGTG
TCCGGCGTGA CCGAGCACAC CGCAATCGTC CGGCTGGCCT GCGACCCGGG TAGTCACATC
GGAGCACGGC TCGAACGCAC CCAGCTGCTC GGTGCCGTGG CCGGTGGGCA GGGACCGGGC
ACGTTGACCT TCACGCTGTA CGACGCCTCA TATCGGGTGC AGAAAGGTGA TCGGCTGGTC
ACCTTCGGCA GTCTCGACTA CGTCGCCGGC GTCCCGATCG GTATGGTCAC CAAGGTCACT
GACGTCGATG GTCTGTCGCG GACCGCCGAG GTCAAACCGT ACGCGTCGGT CGGCACCCTG
GACCTGGTCG GGGTGGTGGT CGGCAAGCCA CCGGCCGACC CCGGCGACCG GGTGCTGACG
CCCAGGCCGG TGCCGACCGA GCCGGCCGCG TCCGTTCCGC CGACCGCGTC CGTTCCGCCG
GCCCCGCTGT CACCCACCGC TGGGTCGCCG GTGGGGGGAT CATTGGCCGG GGCGGCATCC
GGCGTCGGGG GCGGAGCGGG TTGA
 
Protein sequence
MGRGTRRSRL VIVALLIIAF TLITLDYRTG RSATGARGVL HSIFGGVENG VTTVTRPIGR 
TASSLTHPNR YHDRADRLAE ENARLRRQIA DDTEIGRMST ELADLRLLAD KGQYTIVPAK
VIAVGDVTGT DWTVTINAGR ADGIVVDKTV LNADGLVGTV SGVTEHTAIV RLACDPGSHI
GARLERTQLL GAVAGGQGPG TLTFTLYDAS YRVQKGDRLV TFGSLDYVAG VPIGMVTKVT
DVDGLSRTAE VKPYASVGTL DLVGVVVGKP PADPGDRVLT PRPVPTEPAA SVPPTASVPP
APLSPTAGSP VGGSLAGAAS GVGGGAG