| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1207 |
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| Symbol | clpX |
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| ID | 3903561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1440399 |
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| End bp | 1441685 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637878540 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_480314 |
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| Protein GI | 86739914 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0448569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.478447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACGCA TCGGTGATGG CGGTGACCTG CTCAAGTGCT CGTTCTGCGG TAAGTCGCAG
AAGCAGGTGA AGAAGCTCAT CGCCGGCCCT GGCGTCTATA TCTGCGACGA GTGCATCGAT
CTCTGCAACG AGATCATCGA GGAGGAGCTG TCCGAATCCT CCGAGCTCAA ATGGGACGAA
CTGCCCAAGC CGCGCGAGAT CTACGAGTTC CTCGACAGTT ACGTGGTGGG GCAGGAGACG
GCGAAGAAGA CCCTCTCCGT CGCGGTCTAC AACCACTACA AGCGGGTCCA GGCGGGCGGA
TCCAGCGGTG ACGGGAGCAA GGGCGAGGTC GAGCTCGCGA AGAGCAACAT CCTGCTGCTC
GGGCCGACGG GCTGCGGCAA GACGCTGCTC GCCCAGACTC TCGCGCGAAT GCTCAACGTC
CCGTTTGCCA TCGCCGACGC CACCGCGCTG ACCGAGGCGG GCTACGTCGG GGAAGACGTC
GAGAACATTC TGCTCAAACT CATTCAGGCC GCCGACTATG ACGTCAAAAA GGCCGAGACC
GGGATTATCT ACATCGACGA GGTCGACAAG ATCGCCCGGA AGTCGGAGAA CCCGAGCATC
ACGCGGGACG TGTCCGGTGA GGGCGTGCAA CAGGCCCTGT TGAAGATCCT CGAAGGCACC
ACGGCCAGCG TGCCGCCACA GGGCGGGCGC AAGCACCCGC ATCAGGAGTT CATCCAGATC
GACACGACGA ACGTGCTGTT CATCGTGGGC GGGGCGTTCG CCGGGCTCGA CCGGATCATC
GAGTCGAGGA TCGGCAAGAA GTCGCTGGGG TTCCGCGCCG TACTGCACGG CAAGGACGAC
CCGGACGGAT CCGATGTCTT CGGCGACATC ATGCCCGAGG ACCTGCTGAA GTACGGCATG
ATTCCGGAGT TCATCGGCCG GCTCCCGGTG ATCACCAGCG TGTCCAACCT GGATCGTGAG
GCGCTGATCC GCATCCTCAC CGAGCCGAAG AACGCCCTCG TCCGCCAGTA CAAGCGGCTG
TTCGAGCTGG ACAGCGTCGA CCTCGACTTC ACCTCGGACG CGCTCGAGGC CATCGCGGAC
CAGGCGATCC TGCGTGGGAC CGGTGCTCGT GGGCTGCGGG CAATCATGGA AGAGGTCCTG
CTCTCGGTGA TGTACGACAT CCCGAGCCGC AAGGATGTGG CCCGGGTCGT CGTCACCCGC
GAGGTCGTGC TGGAGCACGT CAATCCGACG CTGGTCCCGC GCGACGTCGT GTCCAAGCGG
GCTCCCCGCC AGGAGAAGTC GGCCTGA
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| Protein sequence | MARIGDGGDL LKCSFCGKSQ KQVKKLIAGP GVYICDECID LCNEIIEEEL SESSELKWDE
LPKPREIYEF LDSYVVGQET AKKTLSVAVY NHYKRVQAGG SSGDGSKGEV ELAKSNILLL
GPTGCGKTLL AQTLARMLNV PFAIADATAL TEAGYVGEDV ENILLKLIQA ADYDVKKAET
GIIYIDEVDK IARKSENPSI TRDVSGEGVQ QALLKILEGT TASVPPQGGR KHPHQEFIQI
DTTNVLFIVG GAFAGLDRII ESRIGKKSLG FRAVLHGKDD PDGSDVFGDI MPEDLLKYGM
IPEFIGRLPV ITSVSNLDRE ALIRILTEPK NALVRQYKRL FELDSVDLDF TSDALEAIAD
QAILRGTGAR GLRAIMEEVL LSVMYDIPSR KDVARVVVTR EVVLEHVNPT LVPRDVVSKR
APRQEKSA
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