| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1201 |
|---|
| Symbol | |
|---|
| ID | 3903475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1434027 |
|---|
| End bp | 1434914 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637878532 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_480308 |
|---|
| Protein GI | 86739908 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000142595 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.745599 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC CCCGCCCGTC GATGCTGCCC GCCGCCGTCA CCTACGCCGA CCAGGGATGG
CCGGTGTTCG TCCTCGGACG TACCAAGCGG CCGGTGGCGA ACTGTGAGCC CTGCGCGCAG
GCAGGGCCAG ACCACGACAG GGAAGCCTGC CCGTGTCTGA CCTGCCACAG CTTCTACGCC
GCCACCACCG ACCGAAACCG CATCGTCGCC ATGCTCGCCG CCGTCCCTGA CGGCCTGTTG
GCGATCCGCA CCGGCACCGC CGCCGGCCTG GCCGTCATCG ACATCGACCC CCGCAACGGC
GGCACCCTCG ACCGGTCGCT GATGACCCCC ACAGCCGCCG TGGCCACCGG CGGAGGCGGA
TGGCACCTGT ACTACCGCCA CCCCGGACAT CCGGTGCTCT CCCGGCCCCT CACCGGCGCT
CCCGGCATCG ACATCAAGGC GGACGGCGGG TTGGTGGTCG CGCCGCCGTC ACTGCACCCG
ACCACCGGCC GTCCCTACCA GTGGGCCGGC ACCCGGCCGG TAGCCGAGAT GCCCCCCGCC
CTCATCGCCG CCGTGGCCGC CGATCCGCCC ATGACGAAAC CCGCCCCGCC ACGCAGCTGC
ACACCGGCCC GCGTCTCGTC ACGCGCCGGA GAGGCGGGGG GCATCTCAAA CCCCGCCGCG
TTGCTCGCCG CACACCTGGC CGCCGTCGCC CGAGCACCCG AAGGACGCCG CCGCACCACC
CTCTACGGCG CCGCCCGCGG CATCGCCCGC ATGGTCGCCG CCGGCCACCT CACCACCACC
GAAGCCTGGG CCGCGCTCAC CGACGCCGGA CACACCGCCG ACCAGACCGA CCGCGACATC
AACGCCGCCA TCACCGGCGG ATTCCACGCC GAAGGAGTCC CCACCTGA
|
|---|
| Protein sequence | MTTPRPSMLP AAVTYADQGW PVFVLGRTKR PVANCEPCAQ AGPDHDREAC PCLTCHSFYA
ATTDRNRIVA MLAAVPDGLL AIRTGTAAGL AVIDIDPRNG GTLDRSLMTP TAAVATGGGG
WHLYYRHPGH PVLSRPLTGA PGIDIKADGG LVVAPPSLHP TTGRPYQWAG TRPVAEMPPA
LIAAVAADPP MTKPAPPRSC TPARVSSRAG EAGGISNPAA LLAAHLAAVA RAPEGRRRTT
LYGAARGIAR MVAAGHLTTT EAWAALTDAG HTADQTDRDI NAAITGGFHA EGVPT
|
|---|
| |