Gene Francci3_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1198 
Symbol 
ID3903472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1430071 
End bp1430379 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content75% 
IMG OID637878529 
ProductHNH endonuclease 
Protein accessionYP_480305 
Protein GI86739905 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.938412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTCG GGAACCCGTC GACCCGCCGG CACCTGTTCG CCGCGTTCGG GGGCCGGTGC 
GGCTACTGCC TGACCGCCGC CGCCGATCAT CTCGATCACC TCGTGCCGCG CGCCGCCGGG
GGCACGAACA GCCGCTTCAA CCTGATCCCG GCGTGCACCC CGTGCGGGAC GTCGAAGGGT
GCGCTGTCGG TCGCGGAGTG GGTGGCGCGC CGCGCCGCCG GCACCCTGAC GACCGGCGCC
GGTGCGCCGC CGGTGCCGGT GTACCGGGTG CCGATGAAGC CGGTGAACCA CCGCCCCATC
GCGGCCTGA
 
Protein sequence
MSVGNPSTRR HLFAAFGGRC GYCLTAAADH LDHLVPRAAG GTNSRFNLIP ACTPCGTSKG 
ALSVAEWVAR RAAGTLTTGA GAPPVPVYRV PMKPVNHRPI AA