Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1198 |
Symbol | |
ID | 3903472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1430071 |
End bp | 1430379 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637878529 |
Product | HNH endonuclease |
Protein accession | YP_480305 |
Protein GI | 86739905 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.938412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGTCG GGAACCCGTC GACCCGCCGG CACCTGTTCG CCGCGTTCGG GGGCCGGTGC GGCTACTGCC TGACCGCCGC CGCCGATCAT CTCGATCACC TCGTGCCGCG CGCCGCCGGG GGCACGAACA GCCGCTTCAA CCTGATCCCG GCGTGCACCC CGTGCGGGAC GTCGAAGGGT GCGCTGTCGG TCGCGGAGTG GGTGGCGCGC CGCGCCGCCG GCACCCTGAC GACCGGCGCC GGTGCGCCGC CGGTGCCGGT GTACCGGGTG CCGATGAAGC CGGTGAACCA CCGCCCCATC GCGGCCTGA
|
Protein sequence | MSVGNPSTRR HLFAAFGGRC GYCLTAAADH LDHLVPRAAG GTNSRFNLIP ACTPCGTSKG ALSVAEWVAR RAAGTLTTGA GAPPVPVYRV PMKPVNHRPI AA
|
| |