Gene Francci3_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1190 
Symbol 
ID3903464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1423113 
End bp1424105 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content73% 
IMG OID637878522 
Producthypothetical protein 
Protein accessionYP_480298 
Protein GI86739898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCGTC GTGGCTGGCT CCCGGTAGCC GCGTGTGTGG GGATCGGCCT CAACAGCATC 
CGGCTGCGCG GCCGGGTAGG TGCCATCGAC GTCATCGAAT CGGTGGACCA TGGGCCCCCG
GGGGGCGCGC CCGGCTCGGA CGACCCTCAC GCGCAGCGTC CGCCGTACGT CCTCCTCCTC
GCTTCCGGAG TGCGTCTCGG CCCCGAGCAT CGCCGCGCGG CCGACGCGTA CGCGCGTCGG
CACGGCTGCG AGGTCCTCGA CCTGGTCCCG GCCGAGATGT CGGCGCACCG GATCCTCGAC
CTGGCGCGGA TGGTCGACCC GTCCACCTAC CGGTCAGCCC GGCTGGCCCG CGGTCGCGGT
GCCTTCCAAG CGGTGCTCGT CGATGCAGAG GTGCTGGCCC GCACCGGCCT CACCACCGCG
GACAGCACCG ATCTCACCGA CCTCACCGAC CTCACCGAGG CCGAGCTCGT GGCCGTGCTC
GAGACGTGCA AACGGCACGC CGCCGCGTCC ACCGACCTCG CCGTGCTGCC CGGCCTGGTC
GGTGCCGAGC CGGACGACGG GCGCACCCGG CTGTCCGTGC ACCGCGCCGC CTATGCGTGG
GAGCCCGCCA GACGGGTGCT GCCCGCGCTG CGGGACGCCG CCATCCTGCT CGGGGCTACC
AGCAACCCGC TCGCGGCACT CGCGGCGGTG ACGATGTCCT GGCTGCAGCC GGTCGCCGTG
GGCGGTAGCC GACTATTGGT GACGCCCGGG ACGCTGCGGC GCAGCATGCT GACGCGGCGA
CGCGGCGCCC TCCTCCAGCT GGTGGGGATG CCGAGCCGAA CCCGTGATCT TCTCGGCGCA
CCGACCATCG GCCCGGACCC GGCGACGTGC CCGCGGGCTC CGCGACCGAT CAGAACGGCG
GGCAGGCTCA CCCCCACGGA GATCGCCGAG AAGAGATCCC AGTACCGGCG GGAGCTCGCC
AGGGTGACCC GCAAAGTCTG TTTGTGCAGG TAG
 
Protein sequence
MRRRGWLPVA ACVGIGLNSI RLRGRVGAID VIESVDHGPP GGAPGSDDPH AQRPPYVLLL 
ASGVRLGPEH RRAADAYARR HGCEVLDLVP AEMSAHRILD LARMVDPSTY RSARLARGRG
AFQAVLVDAE VLARTGLTTA DSTDLTDLTD LTEAELVAVL ETCKRHAAAS TDLAVLPGLV
GAEPDDGRTR LSVHRAAYAW EPARRVLPAL RDAAILLGAT SNPLAALAAV TMSWLQPVAV
GGSRLLVTPG TLRRSMLTRR RGALLQLVGM PSRTRDLLGA PTIGPDPATC PRAPRPIRTA
GRLTPTEIAE KRSQYRRELA RVTRKVCLCR