| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1181 |
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| Symbol | |
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| ID | 3905292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1412232 |
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| End bp | 1413083 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637878513 |
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| Product | bifunctional deaminase-reductase-like |
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| Protein accession | YP_480289 |
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| Protein GI | 86739889 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.366143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATGA GCCGGCGTGT CGACGATGAC ACTGTCGACA GTGTCATCGT CGACAATGAC
ACTGTGGGCC AAGGCGCTGT TGCTGGCCGG CCGTACGTCA TCTGCAGCTG CGCGATGTCG
TTGGATGGGC ACATCGACGA CAGCTCGGCT GAGCGGATGA TCCTCTCCAG TGCCGCCGAT
CTCGACCGGG TGGACGAGGT GCGTGCCGGC TGTGACGCGA TCCTCGTCGG CGCGGCCACT
GTCCGGCGGG ACAATCCCCG TCTCGCCGTG CGCGCGCAGC ACCGTCGGGT GGCGCGAGAG
GCGGCCGGAC GCCCGCCCAC GCCGATCAAG GTCGTGCTGT CCGGCGGGGG AGACCTCGAT
CCGAGCGCTC GGCTGTTCAC CGCCGACCCG GTCGAGACGA TCATCTACCG TCGGGCTGGA
TCATCGTTGG CGATCGCCGA GCCGACCTCG TCTCCCGAGC CGACCTCGTC TCCCGAGCCG
TCGACGCCGC AATCGGCGCC GGCTGCGATC CGCACCGCGC CCGCTACCCG CGCCGCGCGC
GTCATCCTGG TCGAACTCCC CGGTCGGCCC CGGGTCGAGG TCGCCGCCAT CCTGACCGAT
CTCGCCCGGC GTGGCGTCCG TCGGCTGCTG GTGGAGGGTG GTACCTCGCT GCATACGGCC
TTCCTCACCG CCGGCCTGGT CGACGAGCTG CATCTCACCG TCGCCCCGTT CTTCGTCGGC
GAGCGCGATG CGCCGACCTT CGTGGGACCG GGGGTCTTCC CCAACGACGT CCACTCGCCC
CTTCGCCTTG CCGAGGTCCG ACAACTCGAC GATGTGGTTT TTCTTCGGTA TCTGGCACCG
ACGTCTCACT AA
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| Protein sequence | MGMSRRVDDD TVDSVIVDND TVGQGAVAGR PYVICSCAMS LDGHIDDSSA ERMILSSAAD
LDRVDEVRAG CDAILVGAAT VRRDNPRLAV RAQHRRVARE AAGRPPTPIK VVLSGGGDLD
PSARLFTADP VETIIYRRAG SSLAIAEPTS SPEPTSSPEP STPQSAPAAI RTAPATRAAR
VILVELPGRP RVEVAAILTD LARRGVRRLL VEGGTSLHTA FLTAGLVDEL HLTVAPFFVG
ERDAPTFVGP GVFPNDVHSP LRLAEVRQLD DVVFLRYLAP TSH
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