Gene Francci3_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1174 
Symbol 
ID3905285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1401612 
End bp1402397 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content72% 
IMG OID637878506 
Producthypothetical protein 
Protein accessionYP_480282 
Protein GI86739882 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.914249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGG CTTTCCGCGC CGAATGGGTG CCGCTGTTGC GGACCCGGTT CCTGCTCGGG 
ACGCTGGGGG CGGTCATCGC CTCGGCCCTG CTCGGCACCG TTCTGACCTT CGTCTCGGTG
GGGCACAACG ACTTCGATGG CGACCCCGTC ACGGCCAGCG GGCTGTCCGC CGCGAACGGC
GTCGCGCAGG GGGTGCAGGC GGTCAGCATC CTGCTCGGCG TGGTGGCCCT GTCCGTCGTC
GCCGCGTCGC TCGCAGGCGA CCATGCGCAC GGGGCCCTGC GCAACCAGCT CGTCGCCCAG
CCGCACCGGC TCCGGCTTCT CGCCGGCAAA CTGCTGGCTC TGGCGGCGTT CGTGGTCCTC
GTCATCGCCG TGGCGACCGT GGTTTCGGTC GCCCTGTCCT TCGCGCTCGC GCCGCTGAAG
GGGGTGTCGA CGGCCGCCTG GAGCAGCGCG GCGGGGCTGG CCGAACTGAG CAAGAGCTTT
GTCAACCTGT GCGCCGGATC GCTCGGCTAC GCCGCGCTCG GCGCCCTGGC CGCGATCGTC
TTCCGCGCGC CTGCCGCGGC GATCGCGGTC GCGGTCGCCT ACGCGCTGCC GGTGGAGATG
CTGGTCACGC GCATCTACGG TCCCGCCCGG GCCTGGCTGC CGGTGCAGCT GATGGAGGCG
ATCGCCACCG GTGGCTTCGC CGTCGCCACG CCCTACGCCG ACGCGCTGCT GCGCGGGCTG
GTCTACTGCA CCGCGATGGT GCTGGTCGCC GTCGTCCTCT TCTGGCGCCG GGACATGACC
TCATAA
 
Protein sequence
MITAFRAEWV PLLRTRFLLG TLGAVIASAL LGTVLTFVSV GHNDFDGDPV TASGLSAANG 
VAQGVQAVSI LLGVVALSVV AASLAGDHAH GALRNQLVAQ PHRLRLLAGK LLALAAFVVL
VIAVATVVSV ALSFALAPLK GVSTAAWSSA AGLAELSKSF VNLCAGSLGY AALGALAAIV
FRAPAAAIAV AVAYALPVEM LVTRIYGPAR AWLPVQLMEA IATGGFAVAT PYADALLRGL
VYCTAMVLVA VVLFWRRDMT S