Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1174 |
Symbol | |
ID | 3905285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1401612 |
End bp | 1402397 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637878506 |
Product | hypothetical protein |
Protein accession | YP_480282 |
Protein GI | 86739882 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.914249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACGG CTTTCCGCGC CGAATGGGTG CCGCTGTTGC GGACCCGGTT CCTGCTCGGG ACGCTGGGGG CGGTCATCGC CTCGGCCCTG CTCGGCACCG TTCTGACCTT CGTCTCGGTG GGGCACAACG ACTTCGATGG CGACCCCGTC ACGGCCAGCG GGCTGTCCGC CGCGAACGGC GTCGCGCAGG GGGTGCAGGC GGTCAGCATC CTGCTCGGCG TGGTGGCCCT GTCCGTCGTC GCCGCGTCGC TCGCAGGCGA CCATGCGCAC GGGGCCCTGC GCAACCAGCT CGTCGCCCAG CCGCACCGGC TCCGGCTTCT CGCCGGCAAA CTGCTGGCTC TGGCGGCGTT CGTGGTCCTC GTCATCGCCG TGGCGACCGT GGTTTCGGTC GCCCTGTCCT TCGCGCTCGC GCCGCTGAAG GGGGTGTCGA CGGCCGCCTG GAGCAGCGCG GCGGGGCTGG CCGAACTGAG CAAGAGCTTT GTCAACCTGT GCGCCGGATC GCTCGGCTAC GCCGCGCTCG GCGCCCTGGC CGCGATCGTC TTCCGCGCGC CTGCCGCGGC GATCGCGGTC GCGGTCGCCT ACGCGCTGCC GGTGGAGATG CTGGTCACGC GCATCTACGG TCCCGCCCGG GCCTGGCTGC CGGTGCAGCT GATGGAGGCG ATCGCCACCG GTGGCTTCGC CGTCGCCACG CCCTACGCCG ACGCGCTGCT GCGCGGGCTG GTCTACTGCA CCGCGATGGT GCTGGTCGCC GTCGTCCTCT TCTGGCGCCG GGACATGACC TCATAA
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Protein sequence | MITAFRAEWV PLLRTRFLLG TLGAVIASAL LGTVLTFVSV GHNDFDGDPV TASGLSAANG VAQGVQAVSI LLGVVALSVV AASLAGDHAH GALRNQLVAQ PHRLRLLAGK LLALAAFVVL VIAVATVVSV ALSFALAPLK GVSTAAWSSA AGLAELSKSF VNLCAGSLGY AALGALAAIV FRAPAAAIAV AVAYALPVEM LVTRIYGPAR AWLPVQLMEA IATGGFAVAT PYADALLRGL VYCTAMVLVA VVLFWRRDMT S
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