| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1157 |
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| Symbol | |
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| ID | 3903585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1377727 |
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| End bp | 1380000 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637878489 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_480265 |
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| Protein GI | 86739865 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.337105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGGACC CCACCATCGA CCCGGTCCTC GCCGAACTCG CCGCAGTGTC CGGCGTGGCG
ACGTCCTACC TCGGGGCCGA CGGTGTCCCG GTACAGGTCG CGCCGGACAC CGTCCGGGCC
GTCCTGCGGC TGGCGGGGGT CGATCCGACG GATCCCGCCG CAGCGCTCGC GGCGGCGCTG
GAGCGGCCTT GGCGACGCCG GGTGCCGGCC TGCGCCGTCG TCGTCGCCGC AGCACCGCGC
CCGGTGGTCG TTCACACGCC CGTGGAGATC ATTCCACACG CTGAGCTGGA GCTCGGCACC
GGCGGCCGAA TCGTCCTCGA TCCCCCTGGC GCCCCCCTGG CCGAGCGGGT GCTCGACGGC
GTGCCCTGGG TCGCCCGGCC GATAGGGCTC CCGGCGGGTC TGCCCTTGGG GGACCACGTG
CTGCACATCG ACGCCGGAAC CGAGCGGCAT CGCTGCCAGG TCGTTGCCGT GCCGGCCGCG
GTGCCCGGCC CCGCCGCCCT CGCCCCGCCG GCCCGCGCCT GGGGCTGGAT GATCCAGCTC
TACGCGCTCA CCTCGACGTC GTCCTGGGGG ATGGGGGACT ATGGCGATCT CGCGACGCTC
GCCGACTGGT CGGGCCGGGC GGGTGCCGAC GTGCTGCTGG TGAATCCGCT GCATGCGGGT
GCGCCGACCC TGCCCGTCGC GGCGTCCCCC TACTCGCCCG CAAGCCGCCG TTTCGTCTCC
CCGCTCTACC TGCGACCGGA GCGGACGCCC GAGTACGCCC GGGCCGATCC CGCCACCCGG
GCTGCCGTTG ACAAGCTCGC CCGCGGCGCC CGTCGCGACG GGCGGCGGGA CGGTCTGCTC
GATCGGGACG CGGTGTGGCG GGCGAAGCTG GCCGCGCTGG AACTGCTCTT CGAGGTCTTC
CGGCGTGGCG GCGAGCAGGT GGCATCCGCC GGGTCCGCCG CTTCCGAGCC CGCCGCCGAG
CCGGCCGGGT CCGACCTGAT CGATTTCGCG ACCTGGAGCG CGCTCGCCGA GCGGTACGGC
CCGGACTGGC GGACCTGGCC GGCGCGTCTC GCTCATCCGG GCGCGCCCGC CGTCGCCGAG
GCGAGGGCGC AGCTGGCCGA CCGTGTCGCC TTCCACGTGT GGCTCCAGCA GCGCTGCGAC
CAGCAGCTCG CCGCGGCGCA GGCCGCCGCC CGGGCCGCCG GGATGGCCGC CGGGATCGTG
CACGACCTGG CCGTCGGCGT CGATCCGGGC GGTGCGGACG CCTGGGCGCT GCAGGACGTT
CTCGCCGTCG GCGCGAGCGT GGGGGCCCCA CCGGACACCT TCAACCAGCA GGGCCAGGAC
TGGGGGCTGC CGCCGTGGCG GCCGGACGCC CTGGCCGAGG CCGGGTACGC GCCGTTGCGT
CAGATGGTCG CCTCGGTGCT GCGCCGCGGC GGCGGGCTGC GGGTCGACCA CATCCTCGGC
CTGTTCCGGC TGTGGTGGAT TCCGGCTGGG GCGGGCGCCG CTCACGGGAC ATACGTGCGT
TACGACGCCG AGGCGATGCT CGGCCTGCTC GCGTTGGAGG CCGCCCGTGC CGGCGCCGTC
GTCGTCGGGG AGGATCTGGG TACCGTCGAG GCATCGGTGG CGACGACGCT CGCCCGCATG
AACGTGCTGG GTTCGACGGT GCTGTGGTTC GAGCAGGACG CCGAGGGCCG CCCGTTGCCG
CCGACGGCGT ACCGGGCGGC GACGATGGCC AGCCTCACCA CGCACGACCT GCCCACCGCC
GCCGGCTACC TCGAGGGCGA GCACGTGCGC ACCCGCGCCC GGTTGGGGCT GCTCGGGCGT
TCGGAGGAGG CCGAGGCGGC CGGCTGGCGA GCCGAGCGGG ACGCGTTGGT CGAGCTGGTG
CGATCCGAGG GGCTGGTGGA TCCGGCGGGC GCGGCGGCGG GCCTCGGCGG ACGGGGGAAC
CCCGGCGGGC GCGGCCGGCC GGAGTTCGAC CCCGCCGTTC GGCAGGAGAT CGTTTTCGCG
CTGCACCGGC TGCTGGTGCG GTCTTCGTGC CGCATCGTGC TCGGGTCGCC GGGTGACGCG
CTGGGCGACC GGCATCAGCC GAACCTGCCG GGCACGACCG ACGCCTATCC GAACTGGCGG
CTCCCGGTGA CCGACTCCGC CGGTCGGCCG GTTACGGTGG AACGTCTGCT GACCGATCCG
GACGTGCGCC GGCTTGGCGA GTTCCTCGCC CAGGTCCGGG TTGCCCAGGT CCGGGGCGTG
TCGTCCACCG GTGCGGCATC CCCAGACGAG GACCGTAACC CCATTTCCCG GTAA
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| Protein sequence | MVDPTIDPVL AELAAVSGVA TSYLGADGVP VQVAPDTVRA VLRLAGVDPT DPAAALAAAL
ERPWRRRVPA CAVVVAAAPR PVVVHTPVEI IPHAELELGT GGRIVLDPPG APLAERVLDG
VPWVARPIGL PAGLPLGDHV LHIDAGTERH RCQVVAVPAA VPGPAALAPP ARAWGWMIQL
YALTSTSSWG MGDYGDLATL ADWSGRAGAD VLLVNPLHAG APTLPVAASP YSPASRRFVS
PLYLRPERTP EYARADPATR AAVDKLARGA RRDGRRDGLL DRDAVWRAKL AALELLFEVF
RRGGEQVASA GSAASEPAAE PAGSDLIDFA TWSALAERYG PDWRTWPARL AHPGAPAVAE
ARAQLADRVA FHVWLQQRCD QQLAAAQAAA RAAGMAAGIV HDLAVGVDPG GADAWALQDV
LAVGASVGAP PDTFNQQGQD WGLPPWRPDA LAEAGYAPLR QMVASVLRRG GGLRVDHILG
LFRLWWIPAG AGAAHGTYVR YDAEAMLGLL ALEAARAGAV VVGEDLGTVE ASVATTLARM
NVLGSTVLWF EQDAEGRPLP PTAYRAATMA SLTTHDLPTA AGYLEGEHVR TRARLGLLGR
SEEAEAAGWR AERDALVELV RSEGLVDPAG AAAGLGGRGN PGGRGRPEFD PAVRQEIVFA
LHRLLVRSSC RIVLGSPGDA LGDRHQPNLP GTTDAYPNWR LPVTDSAGRP VTVERLLTDP
DVRRLGEFLA QVRVAQVRGV SSTGAASPDE DRNPISR
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