Gene Francci3_1149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1149 
Symbol 
ID3903577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1366195 
End bp1366617 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content68% 
IMG OID637878481 
Productglobin 
Protein accessionYP_480257 
Protein GI86739857 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.572775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCAGA ATGGACGGGT GAACCAGTCT CCTCCGCGCA CTCTCCCGAT CAGCTCCTTC 
TACGACGCCG CCGGCGGCGA ACCGACGTTC CGGAAGCTGG TCGCCCGGTT CTACCAGGGT
GTGGCGAACG ATCCGGTACT GCGCCCGCTC TACCCGGAAG AGGATCTGAC CGGCGCTGAG
GAGCGCCTGC GCATGTTCCT CATCCAGTAC TGGGGTGGCC CGACCGACTA CCAGGAGCAG
CGCGGGCATC CTCGGCTGCG GAGGCGGCAC GCCCCGTTCG CGATCGGCCC GACGCAGCGG
GACGCCTGGC TGAAGATCAT GCGGGCCGCG GTCGACTCCC TGGACCTGCC GCCCGATCTC
GACAGGCAGC TCTGGGACTA TCTGTCGATG GCGGCGAATT CGCTGCAGAA CCGACCCGAC
TGA
 
Protein sequence
MPQNGRVNQS PPRTLPISSF YDAAGGEPTF RKLVARFYQG VANDPVLRPL YPEEDLTGAE 
ERLRMFLIQY WGGPTDYQEQ RGHPRLRRRH APFAIGPTQR DAWLKIMRAA VDSLDLPPDL
DRQLWDYLSM AANSLQNRPD