| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1113 |
|---|
| Symbol | |
|---|
| ID | 3905455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1327136 |
|---|
| End bp | 1328095 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637878445 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_480222 |
|---|
| Protein GI | 86739822 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0629842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.748747 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACACTG CCGAGATCAT GACCGCCTTC ACCAGCGGCC TGGCCGACAT CAATCTTGCT
GAGCCTGACA CGGCTCGCGG TGGTGAGAAG GCTGCGGAAA GAATGAAAAC GGCCAGCTCG
ACAATCTATG ACATGGCCGC CACCCTCTCG GCGAAGGGGG ACCTGTGGAA CTGGGGGATG
TATGACCCTG AGATCGTCGA CGAGATCCGG GCTCGGTTGC CAGGGTTCGG TGAGTTCGGC
ACGGACGGCT TCAGCGAGCA ATTGTACTTC CTGGCTCTGC GGGACCTGCC GATCGGTCTG
GACGACTACG ACGGTCGCAC GGTGCTGGAA GTCGGCTGCG GCACCGGGGA AGGCCTGAAC
TTCCTTTCCC GTATCGCCCG TGGCGCACGG ATGACCGGCC TGGACCTGTC GCCGCGAGCC
ATCGCCAGGG CTTCGGCGAC CCTCGCGCGT GCGGACGTAC TGGAGTTCGT GCACGGCGAC
GCCGAGAAAC TGCCTTTCGT TGACGGCTCC GTGAACATAC TCGTCAACAT AGAGAGCTCG
CACAACTATC CTGATCTCGG CAGATTCCTC CGGGAGGTGG AACGTGTGCT CAGCCCCGGC
GGCATCCTCA CCCACATTGA CGTCTTCACG CGTCAGCGTT ACGCGGCGAT GCGCCGGATG
ACCGCGGAGA TCGACGGCCT GACCTGGGTC ACCGACCACG ACATCTCCGA CCGGGTTCGC
GCGGCGATCG GCCGCCGGAT GGCGTCCGAC AGCCATTTCC ACGCCACGCT CGCGCGGCAG
CGGATGAACC CGATGGCGCG CAGGATCGCG GCACACAGCC AGATCCTGAT GTTCGGCGGC
ATGTTCGCGG GATATCAGCC GCCCGCCGTG ATCAGGCTGC TGAGCAGGAT CGGGATCGTG
CCCTGGGTGA GCGGCCTGCC GATGGAGAGC TACCGTCACC AGGTAGCCGT CCGCCGGTGA
|
|---|
| Protein sequence | MNTAEIMTAF TSGLADINLA EPDTARGGEK AAERMKTASS TIYDMAATLS AKGDLWNWGM
YDPEIVDEIR ARLPGFGEFG TDGFSEQLYF LALRDLPIGL DDYDGRTVLE VGCGTGEGLN
FLSRIARGAR MTGLDLSPRA IARASATLAR ADVLEFVHGD AEKLPFVDGS VNILVNIESS
HNYPDLGRFL REVERVLSPG GILTHIDVFT RQRYAAMRRM TAEIDGLTWV TDHDISDRVR
AAIGRRMASD SHFHATLARQ RMNPMARRIA AHSQILMFGG MFAGYQPPAV IRLLSRIGIV
PWVSGLPMES YRHQVAVRR
|
|---|
| |