Gene Francci3_1113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1113 
Symbol 
ID3905455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1327136 
End bp1328095 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content65% 
IMG OID637878445 
Productmethyltransferase type 11 
Protein accessionYP_480222 
Protein GI86739822 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0629842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.748747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACTG CCGAGATCAT GACCGCCTTC ACCAGCGGCC TGGCCGACAT CAATCTTGCT 
GAGCCTGACA CGGCTCGCGG TGGTGAGAAG GCTGCGGAAA GAATGAAAAC GGCCAGCTCG
ACAATCTATG ACATGGCCGC CACCCTCTCG GCGAAGGGGG ACCTGTGGAA CTGGGGGATG
TATGACCCTG AGATCGTCGA CGAGATCCGG GCTCGGTTGC CAGGGTTCGG TGAGTTCGGC
ACGGACGGCT TCAGCGAGCA ATTGTACTTC CTGGCTCTGC GGGACCTGCC GATCGGTCTG
GACGACTACG ACGGTCGCAC GGTGCTGGAA GTCGGCTGCG GCACCGGGGA AGGCCTGAAC
TTCCTTTCCC GTATCGCCCG TGGCGCACGG ATGACCGGCC TGGACCTGTC GCCGCGAGCC
ATCGCCAGGG CTTCGGCGAC CCTCGCGCGT GCGGACGTAC TGGAGTTCGT GCACGGCGAC
GCCGAGAAAC TGCCTTTCGT TGACGGCTCC GTGAACATAC TCGTCAACAT AGAGAGCTCG
CACAACTATC CTGATCTCGG CAGATTCCTC CGGGAGGTGG AACGTGTGCT CAGCCCCGGC
GGCATCCTCA CCCACATTGA CGTCTTCACG CGTCAGCGTT ACGCGGCGAT GCGCCGGATG
ACCGCGGAGA TCGACGGCCT GACCTGGGTC ACCGACCACG ACATCTCCGA CCGGGTTCGC
GCGGCGATCG GCCGCCGGAT GGCGTCCGAC AGCCATTTCC ACGCCACGCT CGCGCGGCAG
CGGATGAACC CGATGGCGCG CAGGATCGCG GCACACAGCC AGATCCTGAT GTTCGGCGGC
ATGTTCGCGG GATATCAGCC GCCCGCCGTG ATCAGGCTGC TGAGCAGGAT CGGGATCGTG
CCCTGGGTGA GCGGCCTGCC GATGGAGAGC TACCGTCACC AGGTAGCCGT CCGCCGGTGA
 
Protein sequence
MNTAEIMTAF TSGLADINLA EPDTARGGEK AAERMKTASS TIYDMAATLS AKGDLWNWGM 
YDPEIVDEIR ARLPGFGEFG TDGFSEQLYF LALRDLPIGL DDYDGRTVLE VGCGTGEGLN
FLSRIARGAR MTGLDLSPRA IARASATLAR ADVLEFVHGD AEKLPFVDGS VNILVNIESS
HNYPDLGRFL REVERVLSPG GILTHIDVFT RQRYAAMRRM TAEIDGLTWV TDHDISDRVR
AAIGRRMASD SHFHATLARQ RMNPMARRIA AHSQILMFGG MFAGYQPPAV IRLLSRIGIV
PWVSGLPMES YRHQVAVRR