| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1099 |
|---|
| Symbol | |
|---|
| ID | 3905770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 1311131 |
|---|
| End bp | 1311880 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637878432 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_480209 |
|---|
| Protein GI | 86739809 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTGAGG ATCCTTGGGA GCCGCCGGCC GTCCTACTCG CGGTCGACCT CGTGATTCTG
ACGCTTCGCG GGACGCGCCT ACAGGTCCTG CTGGTCGAGC GCGGGATCGA GCCGCACCGG
GGTGCGCTCG CGCTCCCAGG CGGCTTCCTC GCACACGCCG AGGAGGGCAT CGGCGCGGCG
GCGCGGCGGG AGCTTGCCGA GGAGGCGGGC TTGGAGGGCG AGGGCCTGTA CCTAGAGCAG
CTCGGGGTCT ATGGCAAACC CGGGCGGGAC CCACGGGGTC GAGTCGTCTC GGTGGCCTAC
CTCGCTGTCG CACCGCGGCT TCCGGAGCCG GTCGCGGGAA CGGACGCCGC GGCTGCATGC
TGGCAGCCGA CGGAATGCGT GCTATCGGGT GACCTGGCCC TTGGCTTCGA CCACCGTCGG
ATCATCGCGG ACGGTGTCGA GCGTGCCCGA ACAAAACTCG AACACTCAGC GCTTGCGACC
GCATTCTGCG GCCCCGTTTT CACCATCAGC GAGCTACAGG CGGTCTACGA AACCGTCTGG
GGAATGCGGC TAGACCCCAG GAACTTCTAT CGAAAGGTTC AGAAGGTGGA CGGATTCATC
GTCCCGACCG GCGGAGAGCA GCGGACGACT GTCGGACGAC CCGCCCGCCT GTTCAGAGCC
GGGCCGAGCG CCGTTCTGTC GCCGCCGATT ACCCGGCCCG TCGACACGGC GAGCGCCGAC
AGTGCCCCTG TCCAAGAAGG GGAGAAATAA
|
|---|
| Protein sequence | MIEDPWEPPA VLLAVDLVIL TLRGTRLQVL LVERGIEPHR GALALPGGFL AHAEEGIGAA
ARRELAEEAG LEGEGLYLEQ LGVYGKPGRD PRGRVVSVAY LAVAPRLPEP VAGTDAAAAC
WQPTECVLSG DLALGFDHRR IIADGVERAR TKLEHSALAT AFCGPVFTIS ELQAVYETVW
GMRLDPRNFY RKVQKVDGFI VPTGGEQRTT VGRPARLFRA GPSAVLSPPI TRPVDTASAD
SAPVQEGEK
|
|---|
| |