| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1076 |
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| Symbol | |
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| ID | 3906419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1281348 |
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| End bp | 1282955 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637878410 |
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| Product | hydrogen:quinone oxidoreductase |
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| Protein accession | YP_480187 |
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| Protein GI | 86739787 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.108784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCG TCGATCTCAA CGTCAGCCCG TTGGGGCGCG TCGAGGGCGA CCTCGACGTC
CGGGTCACGA TCGACGACGG GGTGGTCACC TCGGCGTGGA CCGAGGCGGC GATGTTCCGG
GGTTTTGAGA TCATCCTGCG CGGCAAGGAC CCGCAGGCGG GCCTGATCGT GACCCCGCGG
ATCTGCGGGA TCTGCGGGGG CAGCCACCTG TACAAGTCGG CGTACGCGCT GGACGTCGCG
TGGCGCACCG AGATGCCGCC CAACGCGACG CTGGTCCGCA ACATCGCGCA GGCGTGCGAG
ACGTTGCAGA GCATCCCGCG CTGCTTCTAC GCGCTGTTCG CCATCGACCT CACGAACCGG
AAATACGCCT CCTCGCCGCT GTATGAGGAG GCGGTACGGC GGTTCGCGCC CTACACCGGC
AGCAGCTACG GCCCGGCGGT GGTGCTGTCG GCCAAGCCGG TGGAGGTCTA CGCCATCTTC
GGCGGGCAGT GGCCGCACTC CAGCTTCATG GTGCCCGGCG GGGTGATGTG CGCGCCGACG
CTGTCGGACG TGACCCGCTC CATCGCCATC CTGGAGCACT GGAAGGTCAA CTGGCTGGAG
AAGCAGTGGC TCGGCTGCTC GGTGGAGCGC TGGCTGGCCA ACCGTACCTG GCAGGACGTG
CTCGCCTGGG TGGACGAGAA CCCCGCCCAG CACGACAGCG ACTGCGGCTT CTTCCTCCGG
TACTGCCTAG ACATCGGCCT GGATCGCTAC GGCCAGGGAG TCGGCAACTA CCTGGCGACC
GGGACGTACT TCGCCCCCGA CCTCTACACC CGGCCGACCA TCTCCGGCCG CAACGCGGCA
CTCATCGGCC GGTCCGGGGT GTACGCGGGC GGCGGGTACT TCGAGTTCGA CCAGGCCCGG
GTGCGGGAGG ACGTCACCCA CTCGTTCTAC GAGGGAACCG AGGCGCGCCA CCCGTTCGAC
GGCGAGACCC GGCCCATCGA TCCGGCGCGC GGCCGGGAGC AGGGCAAGTA CAGCTGGGCG
AAGTCACCCC GGTACGAGGT GCCGAACCAC GGATACCTGC CGTTGGAGGC CGGGCCACTC
GCCCGCCGCG TCGCAGCCGC GGCTCCCGGC GCGGGTGCCC ACCAGGACGA CGACCCGTTG
TTCGGGGACA TCCTGGCGGC CATCGGCCCG TCGGTGATGG TCCGCCTGCT GGCCCGGATG
CACGAGGCCG CCAGGTACTA CCAGTGGACG CGGGCCTGGC TCGACCAGCT GGACCTACGC
GAGCCGTTTC ACCTCAAGCC GGTGGAGTAC ACCGAAGGGC GCGGCTTCGG TTCCACGGAG
GCGGCCCGCG GCTCGCTCTC GGACTGGATC GTCATCGAGG ACGGCAAGAT CGCGAACTAC
CAGGTGGTCA CCCCGACCGC CTGGAACATC GGCCCCCGCG ACGGCTCCGA GGCGCCCGGT
CCCATCGAGC AGGCCCTCGT CGGCACGCCC ATCGTGGATC CGGAGAACCC GATCGAGCTC
GGCCACGTGG CCCGCAGCTT CGACTCGTGC CTGGTCTGCA CGGTCCACGC CTACGACGGC
AGGACCGGCC GGGAGCTCAG CAGGTTCGTC ATCAACGACA ACCTATGA
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| Protein sequence | MATVDLNVSP LGRVEGDLDV RVTIDDGVVT SAWTEAAMFR GFEIILRGKD PQAGLIVTPR
ICGICGGSHL YKSAYALDVA WRTEMPPNAT LVRNIAQACE TLQSIPRCFY ALFAIDLTNR
KYASSPLYEE AVRRFAPYTG SSYGPAVVLS AKPVEVYAIF GGQWPHSSFM VPGGVMCAPT
LSDVTRSIAI LEHWKVNWLE KQWLGCSVER WLANRTWQDV LAWVDENPAQ HDSDCGFFLR
YCLDIGLDRY GQGVGNYLAT GTYFAPDLYT RPTISGRNAA LIGRSGVYAG GGYFEFDQAR
VREDVTHSFY EGTEARHPFD GETRPIDPAR GREQGKYSWA KSPRYEVPNH GYLPLEAGPL
ARRVAAAAPG AGAHQDDDPL FGDILAAIGP SVMVRLLARM HEAARYYQWT RAWLDQLDLR
EPFHLKPVEY TEGRGFGSTE AARGSLSDWI VIEDGKIANY QVVTPTAWNI GPRDGSEAPG
PIEQALVGTP IVDPENPIEL GHVARSFDSC LVCTVHAYDG RTGRELSRFV INDNL
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