| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1075 |
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| Symbol | |
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| ID | 3906418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1280768 |
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| End bp | 1281334 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637878409 |
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| Product | peptidase M52, hydrogen uptake protein |
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| Protein accession | YP_480186 |
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| Protein GI | 86739786 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0439307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGG ATCGCGAGGC GGGTGCCGCC TCGCGGCCCC CGGTCGGGCC GCGGGTGCAG
GTCGATCCGC CCGGTTTCGA ACCACCAGGG TGCGAGGTGG CCGTGATCGG CTGCGGCAAC
CTGCTGCGCG GTGACGACGG GGTCGGGCCG ATCCTGGTCC GCCGGCTCGC CGAGACGGGC
GTCCCGGCCG GGGTGCGCCT GGTCGACGGG GGGACCGCCG GGATGGACAC GGCGTTCGCG
ATGCGCGGCG CACGCCGGGT CGTGGTCGTC GACGCCAGCC GCACCGGGGC CGAGCCCGGG
ACCGTGTTCG AGGTCCCGGG CGCACAGCTG GAGAACCTGC CCCTGGACGC GCCGCACCCG
CACGCCTTCC GCTGGGACCA GGCGCTGGCG TTCGGGCGCT GGCTGCTCGG CGACGGCTAC
CCGGACGACG TCGTCGTCTA CCTCATCGAG GCGGGCGGCG TGGAGCCCGG CGCCGATCTC
AGTCCCGCGG TGCGCCGGGC GATGGAACAG GTCCGGGACA TGATCATCTC TGGTCTCGCC
CCCGGGACCG GCGGAACGGA CGGATGA
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| Protein sequence | MTGDREAGAA SRPPVGPRVQ VDPPGFEPPG CEVAVIGCGN LLRGDDGVGP ILVRRLAETG
VPAGVRLVDG GTAGMDTAFA MRGARRVVVV DASRTGAEPG TVFEVPGAQL ENLPLDAPHP
HAFRWDQALA FGRWLLGDGY PDDVVVYLIE AGGVEPGADL SPAVRRAMEQ VRDMIISGLA
PGTGGTDG
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