| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1073 |
|---|
| Symbol | |
|---|
| ID | 3906416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 1278220 |
|---|
| End bp | 1279308 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637878407 |
|---|
| Product | NHL repeat-containing protein |
|---|
| Protein accession | YP_480184 |
|---|
| Protein GI | 86739784 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0871328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGGATCG GCGCCCCGGC GCCCGGCGGG CTGGCCCTGC CGTCGGCGCG GCCGTCGGCG
TCCCGGCTGT ACGCGCCGCG CGGGGTGTGG CTCGGCGACG ACCTGCTCGT GGTGGCGGAC
TCGGGTAACC ACCGGGTGCT GATCTGGCAT GGTCTGCCGG CCGTCGACGG CGCCCCCGCC
GACGTCGTGC TCGGCCAGGC CGACGCGACG AGCGAAGGGC CGGCGGCCGC GGGGCGCGGG
CCCGAACGCG GCCTGCACCT GCCGACCGGC GTGCTCGTCA CGGATGGCCG GCTCGTGGTC
GCCGATGCCT GGCACCACCG GGTGCTGGTC TGGAACGAGG TCCCGACGGT CACCGACACC
GCCCCCGACC TCGTGCTCGG GCAGCCGGAC GCCGACGCCG TCCGCGAGAA CCGGGGCGGC
CCGTGCGGAC CAGACACCTT CTACTGGCCC TTCGGGGTGG CCGTGGTGGG TGGGCGCTTC
TACGTCGCCG ACACCGGTAA CCGGCGGATC CTGGGCTGGT CGAATGGCCT GCCGTCCTCG
CCCGGCCGGC TACCCGACCT GGTGCTGGGG CAGCCCGATC CCACCCGCCG GGACGAGAAC
CGTGGCGGCG CGGCCGGTCC GGCGAGCTTC CGGTGGCCGC ACGACCTCGC CGGCACCGCC
GACCGGCTGC TGGTCGCGGA CGCCGGCAAC CACCGGCTGC TCGGCTGGGC CCCCCATCCC
GACGCCGACG GCGACGCCGA TCTGGTGCTC GGCCAGCCCG ATCTCGCATG CTCCGGGGAG
TTCCCCTACG CGCCCGGCCG GGCCGACGTC CTGCGCTTCC CCTACGCCGT CGACAGCTAC
GGGCACCTGC TGGCCGTCGC GGACACCGCC AACAACCGCG TCCTGCTGTG GGAGGAGCTG
CCGCGGCGCA GTTCCACGCC CGCGACCGGT GTGCTCGGCC AGCCGTCGTT CGCCGAGACC
GGGGAGAACC GGTGGACCCG CGTCGAGGCC GACACCTTCT GCTGGCCGTA CGGCCTCTCG
GTGCGCGGCG ACCGGCTCGC GGTGGCGGAC TCGGGCAACA ACCGGGTCAT GATCTGGCGG
CGGGTATGA
|
|---|
| Protein sequence | MWIGAPAPGG LALPSARPSA SRLYAPRGVW LGDDLLVVAD SGNHRVLIWH GLPAVDGAPA
DVVLGQADAT SEGPAAAGRG PERGLHLPTG VLVTDGRLVV ADAWHHRVLV WNEVPTVTDT
APDLVLGQPD ADAVRENRGG PCGPDTFYWP FGVAVVGGRF YVADTGNRRI LGWSNGLPSS
PGRLPDLVLG QPDPTRRDEN RGGAAGPASF RWPHDLAGTA DRLLVADAGN HRLLGWAPHP
DADGDADLVL GQPDLACSGE FPYAPGRADV LRFPYAVDSY GHLLAVADTA NNRVLLWEEL
PRRSSTPATG VLGQPSFAET GENRWTRVEA DTFCWPYGLS VRGDRLAVAD SGNNRVMIWR
RV
|
|---|
| |