Gene Francci3_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1071 
Symbol 
ID3906414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1275392 
End bp1275673 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content69% 
IMG OID637878405 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_480182 
Protein GI86739782 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.61575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTGG GGATACCGGG CCGGATCATC GAGATCTGGG ACGACCGTGG TACGCGGATG 
GCGATCGTCG ATTTCGGCGG CGTCACCAAG ACGGTGTGCC TCGCCTACCT GCCCGACGCG
ACCGTCGGGC AGTACACGAT CATCCATGCC GGCTTCGGGC TGATCAGGCT GGACGAGGCC
GCGGCGCGGG AGACCCTCGC GATGTTCCGG GACCTGGGGC TGCTCGAGGA GGAGCTGGGA
TCGCGCGCGG CGGAACCGGG CATGACCGGG CCGGGCCGGT GA
 
Protein sequence
MCLGIPGRII EIWDDRGTRM AIVDFGGVTK TVCLAYLPDA TVGQYTIIHA GFGLIRLDEA 
AARETLAMFR DLGLLEEELG SRAAEPGMTG PGR