| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1070 |
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| Symbol | |
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| ID | 3906413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1274289 |
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| End bp | 1275395 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878404 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_480181 |
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| Protein GI | 86739781 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.250969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGTACC TGGCGGAGTT CCGCGACCCG GCGTTGGCCC GCCGGCTGCT GGATGCGATC
ATCGCCACCG CGACCCGGCG CTGGGCGATC ATGGAGGTCT GCGGCGGCCA GACCCACTCG
ATCATCCGCA ACGGAATCGA TCAGCTCCTC ACGGACCAGG TCGAGTTCAT CCACGGCCCC
GGCTGCCCAG TGTGCGTCAC GCCGCTGGAG ACGATCGACC GGGCGCTGGC GATCGCCGCC
CGCCCCGAGG TGATCTTCTG CTCGTTCGGG GACATGCTGC GGGTCCCCGG CAGCGGCATG
GACCTGTTCA TGGTCCGGGC GCGTGGCGGG GACGTCCGGG TGGTCTACTC GCCGCTCGAC
GCGGTCCGCC TCGCCGAGGA GAACCCGGAC CGCCAGGTCG TGTTCTTCGG AGTGGGCTTC
GAGACCACCG CCCCAGCCAA CGCGATGGCC GTGGTGACGG CCCGGCGCCG TGGAATCGAC
AACTTCTCCG TACTTGTCAG CCACGTGCTG GTGCCGCCGG CGATGACCGC GGTCCTCTCC
TCGCCGGCGA ACCGGGTGGC GGCGTTCCTG GCAGCCGGCC ACGTGTGCAC GGTGATGGGC
ACCTTCCAGT ACGAGCCATT GGTGGCGACC TACCGGGTAC CGATCGTCGT CACCGGTTTC
GAGCCGCTCG ACCTGCTCGA CGGGGTGCGC CACGCCGTCG AGCAGCTCGA GGCGGGGCGG
GCAGAACTCG CGAACGCCTA CCCGCGGGCG GTGCGGCCGG CGGGCAACCC GGCGGCCCGG
GAAATCCTCG CCGAGGTTTT CACGGTGTGT GACCGGGCCT GGCGGGGAAT CGGGACAATC
CCGGACTCGG GTTGGCGGCT GTCCGCGGCG TACCGGGACT TCGACGCCGA GGTCCGCTTC
GACGTCGAGG GCCTCACGGT GGCCGAACCG GCCGAATGCC GCAGCGGCGA GGTGTTGCAG
GGCCTGGTCA AACCGCCGCA GTGCCCGGCG TTCGGAACCT CCTGCACGCC ACGCACCCCG
CTCGGCGCGA CGATGGTCTC GGCGGAGGGG GCATGCGCCG CCTACTTCCA GTTCCGGCGA
CTGACTCCGG CGGGCAGCCG TGGCTGA
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| Protein sequence | MRYLAEFRDP ALARRLLDAI IATATRRWAI MEVCGGQTHS IIRNGIDQLL TDQVEFIHGP
GCPVCVTPLE TIDRALAIAA RPEVIFCSFG DMLRVPGSGM DLFMVRARGG DVRVVYSPLD
AVRLAEENPD RQVVFFGVGF ETTAPANAMA VVTARRRGID NFSVLVSHVL VPPAMTAVLS
SPANRVAAFL AAGHVCTVMG TFQYEPLVAT YRVPIVVTGF EPLDLLDGVR HAVEQLEAGR
AELANAYPRA VRPAGNPAAR EILAEVFTVC DRAWRGIGTI PDSGWRLSAA YRDFDAEVRF
DVEGLTVAEP AECRSGEVLQ GLVKPPQCPA FGTSCTPRTP LGATMVSAEG ACAAYFQFRR
LTPAGSRG
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