| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1069 |
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| Symbol | |
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| ID | 3906412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1273235 |
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| End bp | 1274296 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637878403 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_480180 |
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| Protein GI | 86739780 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.582687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGACC CCGTCGACCC GACCGGTTGG ACCTGCCCAC TTCCGCTGCG TGACCATCAC
CAGGTGGTAC TGGGGCACGG CGGCGGCGGC GTGCTGTCGA GCGAGCTGAT CGAGCATCTG
TTCCTGCCCG CGTTCGGGAC CACCGACACG GCGCGGGCAC CGGCGGACTC GGCGGTCCTG
GATGTCGCGG GCGCCCGGCT CGCGTTCTCC ACCGACTCGT ACGTGGTGCG CCCGCTGTTC
TTCCCCGGTG GCTCCATCGG CGAGCTCGCG GTCCACGGCA CCATCAACGA CCTGGCCTGT
GCCGGCGCGG TGCCGGTGGC GCTCTCGGCC GGGTTCATCC TCGAGGAGGG CCTGGAGCTC
GCGGTCCTGG GCCGGGTGGC GCAGGCGATG GGCCGGGCCG CCGCCGCGGC GGGGGTGCGG
CTGGCGACCG GGGACACCAA GGTCGTCGAG CGCGGGCTGG CCGACGGTCT GTACGTGAAC
ACCAGCGGCA TCGGGCTCGT CCCGGCCGAG GTGGACATCC GCCCCGAACG GGCGAGACCC
GGCGACCGGG TCATCGTCTC CGGTCCCGTC GGCGAGCACG GTGTCGCCGT GCTGAGCGTG
CGCGACGGGC TGGAGTTCGG CGGCGAGGTC CGCTCCGACA CGACGGCGCT GCACGGGCTG
GTCGCGGCGG TGCTGGCGGC CGCCCCGGGG GTCCACGCGC TGCGCGACCC GACCCGAGGT
GGCCTCGCGA CCGCGCTGTG CGAGATCGCC GCCGCGTCCG GGACGGGCAT CGAGTTCGCC
GAGCGCGCCG TGCCGGTGCC GCCCGCGGTC GAGGCGGCCT GCGGGTTCCT CGGCCTCGAC
CCGCTGCACG TGGCGAACGA GGGCAAGCTG GTCGCGTTCG TCGCCGACGC CGACGCCGAC
GCGGCGCTCG CGGCGATGCG GGCGCATCCG GCGGGGCGTG ACGCGGCCGT CATCGGCACG
GTCACCGCGG AGCATCCGGG CGTGGTTGTC GGGCGCACCG CGTTCGGGGG AACCCGCATC
GTCGACCGGC CGCTCGGCGA GCAGCTCCCC CGCATCTGCT GA
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| Protein sequence | MADPVDPTGW TCPLPLRDHH QVVLGHGGGG VLSSELIEHL FLPAFGTTDT ARAPADSAVL
DVAGARLAFS TDSYVVRPLF FPGGSIGELA VHGTINDLAC AGAVPVALSA GFILEEGLEL
AVLGRVAQAM GRAAAAAGVR LATGDTKVVE RGLADGLYVN TSGIGLVPAE VDIRPERARP
GDRVIVSGPV GEHGVAVLSV RDGLEFGGEV RSDTTALHGL VAAVLAAAPG VHALRDPTRG
GLATALCEIA AASGTGIEFA ERAVPVPPAV EAACGFLGLD PLHVANEGKL VAFVADADAD
AALAAMRAHP AGRDAAVIGT VTAEHPGVVV GRTAFGGTRI VDRPLGEQLP RIC
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