Gene Francci3_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1061 
Symbol 
ID3905307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1262843 
End bp1263847 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content68% 
IMG OID637878395 
Producthypothetical protein 
Protein accessionYP_480172 
Protein GI86739772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.5944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGC GTATTCTTTA TCGGTCGGTC GGTTCGGAGA ACACGAAGAA CCGACCGACC 
TTCTACAGCA AGATGCTTGC GTTGGCCTCT CTCCTCCGGG CCGTCGAGAA CGTCGACATC
CCGGTACGGA TCGTCTTCGT CAATGACGGC CCTATGCCGG CGGAGCGTCT TGCCGTGATG
ACGTCCGCCG GCGAGGTGCA GTCGGTGCAG TGCGGCAGCA ATCGCGCGTC CTACCGGTAC
GTGCTGCGGA TGCCGCGGGT CCGGCGCTGG TCGCCGGACG ATCTGGTCTG GCTCGCCGAA
GATGACTATT TGTACACGGA AAAATCGCTT TCCAGTCTCG TCGCGGCAGC GACCGCGCTC
CCCGCAGTCG ATTACTTCAC CCTTTACAGC ACGCTGCGAT TCTCCTCAAC CACCACCCGC
CGCCGGCCAA TGATCCACCG GGACGGCGGC AGCCACTCCC ACGCGCCGGT GGTCGACGGC
GTGACCTGGG CCAGGGCCGC CACCACGACC AGCACGTTCG GTCTGCGGGT CGGCACCCTG
CTCGAGGACG AACTGCTGCT GCGCTCGATC CCGTTCGTCG GCGGCGCCTT CGACCGCGCG
ACCTGTCTCA CTCTGCAGGG TTTCCAGCCC TTCCGGCTGG CCGAGCTGAG CGGGGAACCG
CCTGCGTTCG CCCCGCCACC CCCCGCCGCG CGGATCGCTC GTCGGGTGGT GCTGAGCGGG
CTGCGCACGA CACTCAACGC CGTCGCCTTG GCGCGGCCCG AACGGCTGCG CCGCACGATG
CTGGTGCCGG AGCCCTCCAT GGCCACGCAC ATGGAGCTGG GTGAGGCGCT CGTTCCCGGT
CACGACTGGG CGGTCGAGGC CGAGGCCGTG CAGGCCTGGC TACAGGCTCG GCGGCCCGGC
CCGGTGGAGA CGCCGCTGCT CGGCGCCATT GCCACGGCTT CGGGTACGCA GCGATCCTCC
ACCATGCACG GACCCTCCAC CATGCACAGA CCCTCCGTCG CGTGA
 
Protein sequence
MILRILYRSV GSENTKNRPT FYSKMLALAS LLRAVENVDI PVRIVFVNDG PMPAERLAVM 
TSAGEVQSVQ CGSNRASYRY VLRMPRVRRW SPDDLVWLAE DDYLYTEKSL SSLVAAATAL
PAVDYFTLYS TLRFSSTTTR RRPMIHRDGG SHSHAPVVDG VTWARAATTT STFGLRVGTL
LEDELLLRSI PFVGGAFDRA TCLTLQGFQP FRLAELSGEP PAFAPPPPAA RIARRVVLSG
LRTTLNAVAL ARPERLRRTM LVPEPSMATH MELGEALVPG HDWAVEAEAV QAWLQARRPG
PVETPLLGAI ATASGTQRSS TMHGPSTMHR PSVA