| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1057 |
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| Symbol | rpsA |
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| ID | 3905303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1259062 |
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| End bp | 1260540 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637878391 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_480168 |
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| Protein GI | 86739768 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.960366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGAGCA CCACCGACGT ACGACCCGTG GAGACCGTGA CCATCTCGCC CAGCCCGACC
ACACCACAGG TAGCGGTCAA CGACATCGGC TCGGCCGAAG ACTTCCTTGC GGCCGTCGAC
AAGACGATCA AGTTCTTCAA CGATGGCGAC ATCGTTGACG GCATCATCGT CAAGGTCGAC
CGCGACGAGG TGCTGCTCGA CATCGGCTAC AAGACCGAGG GCGTGATCCC GTCCCGGGAA
CTGTCGATCA AGCACGACGT CGACCCGCAC GAGGTCGTCA GTGTGGGCGA CCACGTCGAG
GCCCTTGTCC TCCAGAAGGA GGACAAGGAA GGCCGCCTGA TCCTGTCCAA GAAGCGTGCG
CAGTACGAGC GCGCCTGGGG CACGATCGAG AAGCTCAAGG ACGAGGACGG TGTCGTCACC
GGCACCGTGA TCGAGGTCGT CAAGGGTGGT CTCATCCTCG ACATCGGCCT GCGTGGCTTC
CTGCCGGCTT CGCTTGTGGA GATGCGCCGG GTCCGCGATC TGCAGCCCTA CGTGGGCCGC
GAGCTCGAAG CCAAGATTAT CGAGCTGGAC AAGAACCGCA ACAACGTTGT GCTCTCGCGG
CGGGCCTGGC TCGAACAGAC CCAGAGCGAA GTCCGTTCCG AGTTCCTCGC CCAGCTGGCC
AAGGGCCAGA TCCGCAAGGG CGTGGTCAGC TCCATCGTCA ACTTCGGCGC CTTCGTGGAC
CTCGGTGGTG TGGACGGCCT CGTGCACGTC TCCGAGCTGT CCTGGAAGCA CATCGACCAC
CCGTCCGAGG TGGTCGAGGT CGGCCAGGAG GTTACCGTCG AGGTCCTCGA TGTCGACTTG
GACCGCGAGC GGGTCTCGCT GTCGCTGAAG GCGACGCAGG AGGACCCGTG GCGTCAGTTC
GCCCGGACCC ACGCGATCGG TCAGGTCGTT CCAGGCCGGG TCACGAAGCT GGTGCCGTTC
GGTGCGTTCG TCCGGGTGGA CGAGGGCATC GAGGGTCTGG TCCACATCTC CGAGCTGGCC
GAGCGGCACG TGGAGATCCC CGAGCAGGTC GTGAACGTCG GTGACGAGAT CCTGGTGAAG
GTCATCGACA TCGACCTCGA CCGCCGCCGC ATCAGCCTGT CGCTCAAGCA GGCGAACGAG
GCGACAGGGC TGGCTGTCGA CGGCGAGGCG TTCGACCCGA GCCAGTACGG CATGGAAGCC
AAGTACGACG AGCAGGGTAA CTACGTCTAC CCCGAAGGCT TCGACCCCGA GACCGGGGAA
TGGCTCGAAG GTTACGAGGA GCAGCAGGCG GAATGGGAGC GGCAGTACGC CGAGGCCCAG
GCCCGCTTCG AGGCGCACCA GGTCCAGATC CGGGCCGCGC AGGAGGCCGA TGCCGCCGCG
GCGGCCCCCT CCTCCTACAC CTCCCAGTCC GAGCAGCCTT CCTCGGCGAT CGATGAAGAG
GCGCTGCGTC GGCTGCGTGA GCAGTTCGGT CGGGAGTAG
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| Protein sequence | MTSTTDVRPV ETVTISPSPT TPQVAVNDIG SAEDFLAAVD KTIKFFNDGD IVDGIIVKVD
RDEVLLDIGY KTEGVIPSRE LSIKHDVDPH EVVSVGDHVE ALVLQKEDKE GRLILSKKRA
QYERAWGTIE KLKDEDGVVT GTVIEVVKGG LILDIGLRGF LPASLVEMRR VRDLQPYVGR
ELEAKIIELD KNRNNVVLSR RAWLEQTQSE VRSEFLAQLA KGQIRKGVVS SIVNFGAFVD
LGGVDGLVHV SELSWKHIDH PSEVVEVGQE VTVEVLDVDL DRERVSLSLK ATQEDPWRQF
ARTHAIGQVV PGRVTKLVPF GAFVRVDEGI EGLVHISELA ERHVEIPEQV VNVGDEILVK
VIDIDLDRRR ISLSLKQANE ATGLAVDGEA FDPSQYGMEA KYDEQGNYVY PEGFDPETGE
WLEGYEEQQA EWERQYAEAQ ARFEAHQVQI RAAQEADAAA AAPSSYTSQS EQPSSAIDEE
ALRRLREQFG RE
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