Gene Francci3_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1056 
Symbol 
ID3905302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1256893 
End bp1258578 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content72% 
IMG OID637878390 
Productacyltransferase 3 
Protein accessionYP_480167 
Protein GI86739767 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGGAC CCGCCCTTTC CCTCACGGCC GCAGCCGATT CCGGCGCAGC CGCCGGCCCG 
GCCGGCACCG CTTCCATCCC CGAACCGCGC ACTCCCGCGC CGGTCCGTCC ACCCAAGGTC
GTCTTCGACG GCTTCGACGG CCTGCGCGCG ATCGCAGCGG TCCTCGTGGT CGTCGTGCAC
ACCGCGTTTC CCGCTGGTTT CACCACCAGC AGCCGGCTGG GCCCCTACAC CGCCCGGGGT
GAGATCGGTG TCGCGGTCTT CTTCCTGATC TCGGGGTTCC TGCTCTACCG TCCGTTCGTC
GCCGCCCGGT TCGCCGGCAT CCGCGGCTCG GACGCCGCCG GCTACCTGGT CCGGCGGTTC
ATGCGGATCG TCCCGCTGTA CTGGGTGGCG CTCGCCGTCA CGCTGACCGT GGTCAGCAGC
AAGCGGGTCG GCGTGCACGG CTTGGCCGGT CTGCTCCAGA CGGCGTTCTT CGTCCAGGGT
TATCAGGAGC ACTGGGCGAT CCAGGGCCTC ACCCAGGCCT GGACCCTGGA CGTCGAGGCG
GCGTTCTACC TGGCGATACC GGTGTACGCG TGGCTGCTGC GGCGGCGGGA CCGTCCGCCC
GCCGCCCAGT TGCGCGTGGA ACTCGCCGCG CTCGCGGTTA CGTTCGTCGC CGCCAAGATC
GTTCACTACC TGGTGATTCC GTCCACGCAG ACCTGGATGA ACGGCTGGAA CGTCTGGCTG
CCGGTCTGGT GGGACCTGTT CGCCATGGGC ATGCTGCTCG CCGTGCTCTC GGCCTGGTAC
TCCCGGCAGG GCAGGTCGCC GCGCTGGGCG GAGCTGCCCG GCTCGGGCAC GGTGTGCTGG
GGCATCGCCG CGTTCTTCTA CTGGGTGTCG AGCAGGCATC TCGGCCTGCC GCTCGTGCCG
ATCTTCGAAG CCACGCGGAG CCAGGACATG GGCAAGCACC TGGGCTACGG GTTGTTCGGC
TTCTTCCTGC TGCTCCCGGC GGTGTTCGGC CACGGCGACC GCGGCTGGGT GCGGCCGCTG
CTGGCCAGCC GTCCGCTGGC CTTCCTCGGA GCGATCTCGT ACGGCATCTA TCTGTGGCAC
TCGGCCGTCA TCGACCTGGT GCTGGAGCAC AGCGGCTGGC GGCTGTGGAA GATCCCCTAC
CCGCCGTTTC TCCTGGTGGT CCTCACCCTG ACCGTCGGGG TCTCCACCGT GACGCACTTT
TTGATCGAGC GTCCCTGCAT CACCCTCTCC CGGGAGTGGG CCCGGCGGGC CGACAGATGG
GTGGCGAGGC GCTTCGAAGG GGCGGCGAGG GGCGGGGAGG GTGGCCTCGT GAGCGGGGCC
GGCGGATCGC CGGGCGAGGT CGAGGTGATC GGAAAGCCCG TCGATAGCCC GACGGTGCCA
CTCGCGTCAG GCCTCATGTC ACCACGGAAC ATGACGGACC GGGACGCGCG AGACCCGTCC
CCTCCGGTCC GGTCTCTCGA TCCCGACCTG CCCGGCGTGC CGGATGGACG GGCGTCGCGC
GCCGGGTGGA AGCAGCCCCG GGTCGAGTTC GACGGTCTGG AATGGCTCGG GCCGCAGCCC
GCGCCGCAGC CCGGTGGGCC TGGGGCACAG CCGGCCGAGC GCGGGGGGCC CGAGCGCGGG
GGGCCCGAGC GCGGGGGGCC CGAGCGCGGG GGGCCCGAGC GCGGGGGATC GGCGAGCCGG
CGCTGA
 
Protein sequence
MNGPALSLTA AADSGAAAGP AGTASIPEPR TPAPVRPPKV VFDGFDGLRA IAAVLVVVVH 
TAFPAGFTTS SRLGPYTARG EIGVAVFFLI SGFLLYRPFV AARFAGIRGS DAAGYLVRRF
MRIVPLYWVA LAVTLTVVSS KRVGVHGLAG LLQTAFFVQG YQEHWAIQGL TQAWTLDVEA
AFYLAIPVYA WLLRRRDRPP AAQLRVELAA LAVTFVAAKI VHYLVIPSTQ TWMNGWNVWL
PVWWDLFAMG MLLAVLSAWY SRQGRSPRWA ELPGSGTVCW GIAAFFYWVS SRHLGLPLVP
IFEATRSQDM GKHLGYGLFG FFLLLPAVFG HGDRGWVRPL LASRPLAFLG AISYGIYLWH
SAVIDLVLEH SGWRLWKIPY PPFLLVVLTL TVGVSTVTHF LIERPCITLS REWARRADRW
VARRFEGAAR GGEGGLVSGA GGSPGEVEVI GKPVDSPTVP LASGLMSPRN MTDRDARDPS
PPVRSLDPDL PGVPDGRASR AGWKQPRVEF DGLEWLGPQP APQPGGPGAQ PAERGGPERG
GPERGGPERG GPERGGSASR R